Factsheet for Bra036228.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22091	Canola	golgi, mitochondrion, plastid	100.0	100.0
AT4G02990.1	Thale cress	plastid	81.17	79.67
PGSC0003DMT400007420	Potato	mitochondrion	63.28	70.44
VIT_07s0104g00720.t01	Wine grape	mitochondrion	64.97	65.71
KRH72610	Soybean	plastid	63.84	65.44
Solyc04g005630.2.1	Tomato	nucleus	64.78	63.7
TraesCS2A01G284000.1	Wheat	cytosol	15.63	61.48
TraesCS1A01G252300.1	Wheat	cytosol	44.82	60.1
TraesCS1B01G265700.1	Wheat	cytosol	48.78	59.82
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	41.81	56.92
OQU77962	Sorghum	plastid	53.3	56.83
Os05t0404000-01	Rice	plastid	53.48	55.91
TraesCS1D01G252000.1	Wheat	plastid	52.54	55.8
Zm00001d010340_P001	Maize	plastid	51.79	55.67
HORVU1Hr1G061210.8	Barley	plastid	51.79	55.33
Bra004800.1-P	Field mustard	cytosol	40.11	47.65
Bra012812.1-P	Field mustard	cytosol	14.69	23.28
Bra022367.1-P	Field mustard	plastid	11.49	22.18
Bra024793.1-P	Field mustard	extracellular	10.73	20.07
Bra017269.1-P	Field mustard	plastid	12.24	19.64
Bra028970.1-P	Field mustard	plastid	16.01	17.28
Bra031213.1-P	Field mustard	plastid	19.02	16.11
Bra036876.1-P	Field mustard	cytosol	14.12	15.21
Bra003005.1-P	Field mustard	plastid	12.99	13.83

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.1.1.6	EnsemblPlantsGene:Bra036228	EnsemblPlants:Bra036228.1	EnsemblPlants:Bra036228.1-P
ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058
GO:GO:0009536	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0032502
GO:GO:0042793	GO:GO:0042794	InterPro:IPR038538	UniProt:M4F572	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF24	SMART:SM00733	UniParc:UPI0002541EA9	SEG:seg

Description

AT4G02990 (E=2e-218) | mitochondrial transcription termination factor family protein / mTERF family protein

Coordinates

chrA09:-:7915..9510

Molecular Weight (calculated)

60593.9 Da

IEP (calculated)

7.239

GRAVY (calculated)

-0.314

Length

531 amino acids

Sequence
(BLAST)

001: MKLRLCSGLT KPGLLLVHFM PPSFHSLSYG HGGLGLNVRC AIASRRLSSN PPKRERLRSS SSRRDKDKAK RDSPSSQSLY ARPSLLEMNK EKAANRARVY
101: HFLRGVGIVP DELDGLELPV TSEVMKERVD FLHKLGLTIE DINNYPLVLG CSVKKNMVPV LDYLGKLGVR KSTFTEFLRR YPQVLHASVV IDLAPVVKYL
201: QGLDIKPVDV PRVLERYPEV LGFKLEGTMS TSVAYLIGIG VARREIGGIL TRYPEVLGMR VARVIKPLVE YLEGVGIPKL AMSRLIEKRP HILGFELEDE
301: VKRNVQTLRE FNVREVYLPS VIAQYPEIMG MDLKPKLEAQ RKLLSSVIDL NPEDLGGLIE RMPQFVSLSE APMVKHVGFL KECGFSVEQT REMVIGCPQV
401: LALNIGIMKL SFEYFRKEMR RPLQDLVDFP AFFTYGLEST VKPRHKRIVK KGIKCSLAWM LNCSEEKFEQ RMSYDTIDIE EVESGPASFD MSTLMQPERE
501: EEEEESEYEE EEDDDEDEEF ETKRSNGRFR Q

Best Arabidopsis Sequence Match ( AT4G02990.1 )
(BLAST)

001: MKIRFCNGFT KPGFLLVHFE PPSFFAVRSR SLSDSTYGNL CNHKKRPGTG IGLTVQCAIA NRRFSSRSLD SPRRERSSRS SSSSGRDRDR DKDKGRDSKS
101: LYSRPSLLDM NKEKAANRAK VYEFLRGIGI VPDELDGLEL PVTADVMKER VEFLHKLGLT IEDINNYPLV LGCSVKKNMV PVLDYLGKLG VRKSTFTEFL
201: RRYPQVLHSS VVIDLAPVVK YLQGLDIKPS DVPRVLERYP EVLGFKLEGT MSTSVAYLVG IGVARREIGG ILTRYPEILG MRVARIIKPL VEYLEVLGIP
301: RLAAARLIEK RPHILGFELD DTVKPNVQIL QDFNVRETSL PSIIAQYPEI IGIDLKPKLD TQRKLLCSAI HLNPEDLGSL IERMPQFVSL SESPMLKHID
401: FLTKCGFSID QTREMVIGCP QVLALNLGIM KLSFEYFQKE MKRPLQDLVD FPAFFTYGLE STVKPRHKKI IKKGIKCSLA WMLNCSDEKF EQRMSYDTID
501: IEEVETDPSS FDMNTLMQPE REEESDSEYE EEEDDDDEEF A

Arabidopsis Description

MTERF4Transcription termination factor MTERF4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT96]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.