Factsheet for Bra031213.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13794	Canola	plastid	96.97	96.97
CDY66820	Canola	plastid	95.22	95.98
AT2G21710.1	Thale cress	plastid	88.36	86.43
VIT_03s0063g02590.t01	Wine grape	cytosol	57.89	63.8
KRH24469	Soybean	plastid	57.58	57.85
TraesCS2A01G255200.1	Wheat	cytosol	41.15	55.72
KRH29455	Soybean	mitochondrion	47.85	52.82
PGSC0003DMT400001916	Potato	plastid	57.42	52.25
Solyc01g109630.2.1	Tomato	mitochondrion	57.42	51.06
OQU88410	Sorghum	plastid	48.96	51.0
Os07t0134700-00	Rice	plastid	49.44	50.99
TraesCS2B01G267000.1	Wheat	mitochondrion	48.64	50.33
Zm00001d018756_P001	Maize	plastid	49.12	50.33
TraesCS2D01G255600.1	Wheat	mitochondrion	48.33	50.08
GSMUA_Achr4P23060_001	Banana	mitochondrion	51.04	45.85
Bra012812.1-P	Field mustard	cytosol	13.88	25.97
Bra022367.1-P	Field mustard	plastid	10.85	24.73
Bra024793.1-P	Field mustard	extracellular	11.0	24.3
Bra017269.1-P	Field mustard	plastid	12.28	23.26
Bra004800.1-P	Field mustard	cytosol	14.67	20.58
Bra036228.1-P	Field mustard	golgi, mitochondrion, plastid	16.11	19.02
Bra036876.1-P	Field mustard	cytosol	14.83	18.86
Bra028970.1-P	Field mustard	plastid	12.92	16.46
Bra003005.1-P	Field mustard	plastid	12.6	15.83

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EnsemblPlantsGene:Bra031213	EnsemblPlants:Bra031213.1	EnsemblPlants:Bra031213.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	InterPro:IPR038538
UniProt:M4EQZ0	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF4
SMART:SM00733	UniParc:UPI0002542F6A	SEG:seg	:	:	:

Description

AT2G21710 (E=3e-297) EMB2219 | EMB2219 (embryo defective 2219)

Coordinates

chrA09:-:31980899..31983838

Molecular Weight (calculated)

72978.5 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.330

Length

627 amino acids

Sequence
(BLAST)

001: MLLHCNASCC TSTFSLVSSS LRRQDHSEDS QNTVIRRRHN ARSLSLFTRH NQNLKQNKNL NESPESFVPP RHDDDDRSKL LELSLVTRRT PQFPGSIYAQ
101: SASDPDIASS LPSLRNFLDE GESEREMIAK ALEIRRRVTK EIIKESLVRK GRFGITYATN VTDRLGEFVD HVMIEAAALK RLPEFSETRF NLRARTVIED
201: SNFVPLVRWL KYHEFSYNRI GKIICMSKGN LDSIRIMIEW LKTIHVKGEF IGVAFLRSGD NILQRSREEL DEIVEYLESN GVRRYWMGYV VGRCPELLSF
301: SVEEVKTRVD FFLQMGMNQK DFGTMVFDYP KILGFFSFEE MEKKISYLKE FGLSTEDVGR LLAFKPHLMG CSIEERWKPL VKYFYYLGIS KEGMKRILVV
401: KPILYCIDLE KTIAPKVRFF QDMGIPNEAI GNMLVKFPSL LTNSLYKKIR PVVIFLLTRA GVSQKDIGKV IAMDPALLGC SIGAKLEPNM RYYVSLGIRI
501: HQLGEMIADF PMLLRYNVDI LRPKYSYLRR TMIRPLQDLI EFPRFFSYSL ERRIIPRHTT MVENRVNFKL RFMLACTDEE FKRRVRDKVE RRERFEAGLD
601: SEDSQLLDDT ISDEEEASSD SPEVDEE

Best Arabidopsis Sequence Match ( AT2G21710.1 )
(BLAST)

001: MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP NESQETFVPP PPPPRRDLDG ENRSKLLELS LVTRRTPQFP
101: GSIYAQSASD ADIASSLPSL RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV DHVMIQAAAL KRLPEFSESR
201: FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY
301: VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI
401: PKEGMKRILV VKPILYCIDL EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVVIFLLTR AGVTQKDIGK VIAMDPALLG CSIGTKLEPN
501: MRYYISLGIR FYQLGEMIAD FPMLLRYNVD NLRPKYRYLR RTMIRPLQDL IEFPRFFSYS LERRIIPRHT IMVENRVNFK LRYMLACTDE EFERRVRDKV
601: ERRERFEAGL DSEDSQPSDE NISDQEIAFS DEAEEEEDLT E

Arabidopsis Description

MTERF2Transcription termination factor MTERF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IHL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.