Factsheet for Bra012812.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90610	Canola	cytosol	100.0	100.0
AT4G38160.3	Thale cress	cytosol, nucleus, peroxisome	77.91	69.05
Solyc11g044360.1.1	Tomato	cytosol	58.81	62.15
PGSC0003DMT400059549	Potato	cytosol	59.4	60.67
KRH32500	Soybean	cytosol	58.51	58.51
GSMUA_AchrUn_...	Banana	cytosol	57.61	58.31
KRH19886	Soybean	cytosol	58.21	58.21
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	58.81	55.65
Os08t0515800-01	Rice	cytosol	53.13	53.45
GSMUA_Achr7P20690_001	Banana	cytosol	34.63	52.49
EES14251	Sorghum	cytosol	51.64	51.8
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	51.34	51.5
TraesCS7A01G250000.3	Wheat	cytosol	50.75	51.05
TraesCS7B01G141200.1	Wheat	cytosol	50.75	51.05
TraesCS7D01G248600.1	Wheat	cytosol	46.57	50.16
HORVU7Hr1G051550.3	Barley	mitochondrion	51.34	44.44
Bra024793.1-P	Field mustard	extracellular	18.81	22.18
Bra022367.1-P	Field mustard	plastid	17.61	21.45
Bra017269.1-P	Field mustard	plastid	17.61	17.82
Bra036876.1-P	Field mustard	cytosol	25.97	17.65
Bra004800.1-P	Field mustard	cytosol	22.99	17.23
Bra036228.1-P	Field mustard	golgi, mitochondrion, plastid	23.28	14.69
Bra003005.1-P	Field mustard	plastid	20.9	14.03
Bra031213.1-P	Field mustard	plastid	25.97	13.88
Bra028970.1-P	Field mustard	plastid	20.0	13.62

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EnsemblPlantsGene:Bra012812	EnsemblPlants:Bra012812.1	EnsemblPlants:Bra012812.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0042651	InterPro:IPR038538	UniProt:M4D8K2	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF5	SMART:SM00733	UniParc:UPI0002540768	:

Description

AT4G38160 (E=1e-150) pde191 | pde191 (pigment defective 191)

Coordinates

chrA03:+:22108874..22109881

Molecular Weight (calculated)

37595.2 Da

IEP (calculated)

9.473

GRAVY (calculated)

-0.051

Length

335 amino acids

Sequence
(BLAST)

001: MEVVTSTSSN SMSIKHFLKS KGFDEQSIDK MLTKCKHLEN AQTDVASQNW DYLTNTVGIQ DRKLPYIVSR CPKILTLRLH ERLVPMFECL SSLGRNPREV
101: TSAITKFPPI LAHSLEEKLC PLLAFFQALG VPESHLGKIL LFNPRLISYG IETKLAVIVS FLASLGLDKD SGVIGQVLVK HPFLMGYSVE KRLRPTTEFL
201: KSCVGLSDDG VVSVFVNHPQ VVCRDVGKIL RPNYEYLKEC GFGDAQIASM VAGYPPVLIK SVGNSLRPRI RFLVDVMGRG LDEVAGYPQF FQHGLKKKVE
301: SRYKVVKKSD VDCSLRDMLD CNNKKFHEKF GVLRV

Best Arabidopsis Sequence Match ( AT4G38160.2 )
(BLAST)

001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVF NCNQNGMYML LDKSVSLLAC DYCSNRQAKE VSA

Arabidopsis Description

pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.