Factsheet for HORVU7Hr1G051550.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G250000.3	Wheat	cytosol	82.69	96.1
TraesCS7B01G141200.1	Wheat	cytosol	82.43	95.8
TraesCS7D01G248600.1	Wheat	cytosol	76.74	95.5
Os08t0515800-01	Rice	cytosol	72.87	84.68
EES14251	Sorghum	cytosol	70.03	81.14
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	67.96	78.74
GSMUA_AchrUn_...	Banana	cytosol	48.58	56.8
Solyc11g044360.1.1	Tomato	cytosol	46.25	56.47
KRH32500	Soybean	cytosol	48.06	55.52
KRH19886	Soybean	cytosol	48.06	55.52
PGSC0003DMT400059549	Potato	cytosol	46.25	54.57
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	48.84	53.39
GSMUA_Achr7P20690_001	Banana	cytosol	29.97	52.49
Bra012812.1-P	Field mustard	cytosol	44.44	51.34
CDX90610	Canola	cytosol	44.44	51.34
CDY29073	Canola	cytosol, plastid	44.19	51.04
AT4G38160.3	Thale cress	cytosol, nucleus, peroxisome	46.77	47.88
HORVU6Hr1G054650.2	Barley	plastid	22.48	17.9
HORVU4Hr1G045210.1	Barley	plastid	14.47	16.52
HORVU1Hr1G061210.8	Barley	plastid	20.93	16.3
HORVU5Hr1G089290.3	Barley	cytosol	20.41	14.74
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	10.34	14.29
HORVU6Hr1G082970.1	Barley	cytosol	19.12	14.04
HORVU2Hr1G036490.17	Barley	mitochondrion	15.5	11.93
HORVU0Hr1G013680.1	Barley	mitochondrion	4.91	8.19

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A287WH75	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0042651
EnsemblPlantsGene:HORVU7Hr1G051550	EnsemblPlants:HORVU7Hr1G051550.3	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF5	SMART:SM00733	UniParc:UPI000B488FA4	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:193865656..193869599

Molecular Weight (calculated)

43823.1 Da

IEP (calculated)

10.087

GRAVY (calculated)

-0.134

Length

387 amino acids

Sequence
(BLAST)

001: FRHSAHSLRL RLRLRLRQED SLILPYPPLP RSHLTFPASS ASPLDLDPQE ISPAMTGVGG DAKKSLTQWL GDKGFDEEAI GRMSKRCRNL PNLDAGEASG
101: VWDYLLNDVK IEQRKLRYVV TKCPKVLTMS VNEKLIPTVQ CLTTLQAKPG EIAQAIIKFP PILFHSVEEK LCPLLAFFQT LSISEKQLAK LLMVNPRLIS
201: YSIQAKFSQT VDFLVGLGID REGMIGKILT KEPYIMGYSI DKRLRPTAEF LKSAVGLQGS YLQRVIMNFP SILSRDVDKT LRPNFVFLQS AGFSKDQIMK
301: LVAGYPPVLI KSIKHCLEPR VKFLVEEMGR DKGEVVDYPQ FFHHGLKRSL EYRHKILKRM NSTCSLSEML DCNQKKFAMK FGLIPVA

Best Arabidopsis Sequence Match ( AT4G38160.2 )
(BLAST)

001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVF NCNQNGMYML LDKSVSLLAC DYCSNRQAKE VSA

Arabidopsis Description

pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.