Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19886 | Soybean | cytosol | 97.01 | 97.01 |
| Solyc11g044360.1.1 | Tomato | cytosol | 65.67 | 69.4 |
| PGSC0003DMT400059549 | Potato | cytosol | 66.87 | 68.29 |
| VIT_03s0038g04180.t01 | Wine grape | cytosol, plastid | 71.04 | 67.23 |
| GSMUA_Achr7P20690_001 | Banana | cytosol | 40.0 | 60.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.4 | 60.12 |
| Os08t0515800-01 | Rice | cytosol | 58.81 | 59.16 |
| Bra012812.1-P | Field mustard | cytosol | 58.51 | 58.51 |
| CDX90610 | Canola | cytosol | 58.51 | 58.51 |
| CDY29073 | Canola | cytosol, plastid | 58.51 | 58.51 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 64.78 | 57.41 |
| Zm00001d049743_P001 | Maize | cytosol, mitochondrion, nucleus | 56.72 | 56.89 |
| EES14251 | Sorghum | cytosol | 56.72 | 56.89 |
| TraesCS7A01G250000.3 | Wheat | cytosol | 55.22 | 55.56 |
| TraesCS7B01G141200.1 | Wheat | cytosol | 54.93 | 55.26 |
| TraesCS7D01G248600.1 | Wheat | cytosol | 49.25 | 53.05 |
| HORVU7Hr1G051550.3 | Barley | mitochondrion | 55.52 | 48.06 |
| KRH40190 | Soybean | cytosol | 9.55 | 29.09 |
| KRH43735 | Soybean | plastid | 23.58 | 23.37 |
| KRH13722 | Soybean | plastid | 22.99 | 22.65 |
| KRH01028 | Soybean | plastid | 18.51 | 22.63 |
| KRH74890 | Soybean | cytosol, plasma membrane, plastid | 17.61 | 22.26 |
| KRH70749 | Soybean | plastid | 19.1 | 21.69 |
| KRH12828 | Soybean | plastid | 17.01 | 18.87 |
| KRH37793 | Soybean | plastid | 17.61 | 18.32 |
| KRG94311 | Soybean | plastid | 24.78 | 17.55 |
| KRH57654 | Soybean | mitochondrion, plastid | 24.48 | 17.08 |
| KRH39012 | Soybean | cytosol | 22.39 | 16.78 |
| KRH64303 | Soybean | nucleus | 24.18 | 16.27 |
| KRH09594 | Soybean | cytosol | 27.16 | 15.37 |
| KRH41721 | Soybean | mitochondrion | 22.39 | 15.03 |
| KRH60420 | Soybean | cytosol | 18.21 | 14.95 |
| KRH72610 | Soybean | plastid | 22.99 | 14.86 |
| KRH73870 | Soybean | plastid | 21.49 | 14.69 |
| KRH14270 | Soybean | plastid | 21.19 | 14.29 |
| KRH24469 | Soybean | plastid | 23.28 | 12.5 |
| KRH29455 | Soybean | mitochondrion | 17.91 | 10.56 |
Protein Annotations
| Gene3D:1.25.70.10 | EntrezGene:100816929 | MapMan:15.6.2.2 | EMBL:ACUP02006123 | EMBL:BT095136 | UniProt:C6TC57 |
| EnsemblPlantsGene:GLYMA_10G054400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003723 |
| GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0019843 | GO:GO:0032502 | GO:GO:0042255 | InterPro:IPR038538 | EnsemblPlants:KRH32500 |
| ProteinID:KRH32500 | ProteinID:KRH32500.1 | InterPro:MTERF | InterPro:MTERF_sf | PFAM:PF02536 | PANTHER:PTHR13068 |
| PANTHER:PTHR13068:SF5 | SMART:SM00733 | UniParc:UPI0001B15F4E | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:4941773..4943691
Molecular Weight (calculated)
38180.1 Da
IEP (calculated)
9.782
GRAVY (calculated)
-0.105
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEITSSHNSG SMMWFFKDKG FDDNSAQGMF RKCRRLEGVH QERASENWDY LRSIGIEERK LPSIVSKCPK ILALDLYEKI VPTVECLRTL GTKPNEVASA
101: IAKFPHILSN SVEEKLCPLL AFFQTLGIPE KQIGKMILLN PRLVSYSIAT KLTEIVNFLA NLGLNKDGMI GKVIVRDPYI MGYSVDKRLR PTSEFLKSIG
201: LSEADLQAVA VNFPAILSRD VNKLLVPNYA YLKKRGFEDR QIVALVVGFP PILIKSIQNS LEPRIKFLVD VMGRQVDEVI DYPCFFRHGL KRRIEPRYKL
301: LKERSLNCSL SEMLDCNRKK FFMKFGLLEG HALSN
101: IAKFPHILSN SVEEKLCPLL AFFQTLGIPE KQIGKMILLN PRLVSYSIAT KLTEIVNFLA NLGLNKDGMI GKVIVRDPYI MGYSVDKRLR PTSEFLKSIG
201: LSEADLQAVA VNFPAILSRD VNKLLVPNYA YLKKRGFEDR QIVALVVGFP PILIKSIQNS LEPRIKFLVD VMGRQVDEVI DYPCFFRHGL KRRIEPRYKL
301: LKERSLNCSL SEMLDCNRKK FFMKFGLLEG HALSN
001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVT ASF
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVT ASF
Arabidopsis Description
pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.