CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57654	Soybean	mitochondrion, plastid	91.97	90.62
KRH39012	Soybean	cytosol	81.82	86.58
PGSC0003DMT400052092	Potato	mitochondrion	65.96	64.46
Solyc02g093940.2.1	Tomato	nucleus	65.54	64.05
VIT_14s0171g00230.t01	Wine grape	plastid	65.96	63.03
Bra036876.1-P	Field mustard	cytosol	63.21	60.65
CDY29749	Canola	cytosol	62.79	60.61
CDY16267	Canola	cytosol	61.95	60.41
AT4G14605.2	Thale cress	cytosol	60.89	58.42
GSMUA_Achr3P02690_001	Banana	plastid	58.99	53.86
TraesCS6B01G244200.1	Wheat	plastid	51.16	50.0
TraesCS6A01G214200.1	Wheat	plastid	51.16	50.0
TraesCS6D01G196900.1	Wheat	plastid	51.16	49.9
Zm00001d017130_P001	Maize	plastid	50.95	49.59
HORVU6Hr1G054650.2	Barley	plastid	50.95	49.59
KXG30576	Sorghum	cytosol	51.16	49.19
KRH40190	Soybean	cytosol	6.55	28.18
KRH74890	Soybean	cytosol, plasma membrane, plastid	15.43	27.55
KRH70749	Soybean	plastid	16.28	26.1
KRH19886	Soybean	cytosol	17.97	25.37
KRH37793	Soybean	plastid	16.91	24.84
KRH12828	Soybean	plastid	15.86	24.83
KRH32500	Soybean	cytosol	17.55	24.78
KRH01028	Soybean	plastid	13.32	22.99
KRH43735	Soybean	plastid	15.86	22.19
KRH13722	Soybean	plastid	15.43	21.47
KRH41721	Soybean	mitochondrion	19.66	18.64
KRH60420	Soybean	cytosol	14.8	17.16
KRH73870	Soybean	plastid	17.76	17.14
KRH14270	Soybean	plastid	17.55	16.7
KRH64303	Soybean	nucleus	16.91	16.06
KRH09594	Soybean	cytosol	19.45	15.54
KRH72610	Soybean	plastid	15.86	14.48
KRH24469	Soybean	plastid	17.34	13.14
KRH29455	Soybean	mitochondrion	13.95	11.62

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100775277	MapMan:15.6.2.2	EMBL:ACUP02011928	EnsemblPlantsGene:GLYMA_19G075100	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
UniProt:I1N7E1	InterPro:IPR038538	EnsemblPlants:KRG94311	ProteinID:KRG94311	ProteinID:KRG94311.1	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF9	SMART:SM00733	UniParc:UPI000296DE69
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:27261560..27264906

Molecular Weight (calculated)

53939.7 Da

IEP (calculated)

9.626

GRAVY (calculated)

-0.186

Length

473 amino acids

Sequence
(BLAST)

001: MMKIFSSIQP RTPPFSLYKI FLSHYSRTQL SFPTKVFFCQ AKSGTDGSLN LEVVSPTLLV AEKEEAKAVL TLFLKKQGLS NAIATRTSKK SDHFIDHLVS
101: RLHSKHKSWY LAGRELTTLE IRDTLIPYLE SLFEEHGDIL VNVVENYPNP PGKDKSAVPI PPSNPVSDSK KLKAVSRVSE TDPDGGNLRP HIVYLMDLGM
201: DIEQIRSITR RFPSFAYYSL EGKIKPVVEF FLELGVPKEN ILTILTKRPQ LCGISLSENL KPTMKFFESL GVDKNQWPKV IYRFPALLTY SRPKVMESID
301: FLLELGLSEE SIGKILTRCP NIVSYSVEDN LRPTAKYFHS LGVEVGVLLF RCPQNFGLSI ENNLKPATEF FLERGYTLEE IGTMISRYGA LYTFSLTENL
401: IPKWDFFLTT GYPKSELVKF PQYFGYNLEE RVKPRFTIMK KYGVKLLLNQ VLSLSSSNFD EALKKKMKKM QVS

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.