CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017130_P001	Maize	plastid	89.84	90.95
TraesCS6B01G244200.1	Wheat	plastid	81.3	82.64
TraesCS6D01G196900.1	Wheat	plastid	81.3	82.47
TraesCS6A01G214200.1	Wheat	plastid	80.89	82.23
HORVU6Hr1G054650.2	Barley	plastid	79.67	80.66
KRH39012	Soybean	cytosol	48.37	53.24
GSMUA_Achr3P02690_001	Banana	plastid	55.49	52.7
Solyc02g093940.2.1	Tomato	nucleus	51.83	52.69
PGSC0003DMT400052092	Potato	mitochondrion	51.22	52.07
KRH57654	Soybean	mitochondrion, plastid	50.61	51.88
KRG94311	Soybean	plastid	49.19	51.16
VIT_14s0171g00230.t01	Wine grape	plastid	50.81	50.51
AT4G14605.2	Thale cress	cytosol	49.39	49.29
Bra036876.1-P	Field mustard	cytosol	49.19	49.09
CDY16267	Canola	cytosol	48.37	49.07
CDY29749	Canola	cytosol	48.78	48.98
EES14251	Sorghum	cytosol	18.7	27.54
KXG39318	Sorghum	plastid	15.24	23.96
OQU90879	Sorghum	plastid	14.23	21.94
EES07645	Sorghum	mitochondrion	20.33	20.45
OQU85198	Sorghum	mitochondrion, plastid	11.18	19.71
OQU77962	Sorghum	plastid	17.07	16.87
OQU89932	Sorghum	plastid	20.33	16.42
EER97446	Sorghum	mitochondrion	16.06	15.61
OQU88410	Sorghum	plastid	16.46	13.46

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A194YQV5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0006970
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	InterPro:IPR038538	EnsemblPlants:KXG30576
ProteinID:KXG30576	ProteinID:KXG30576.1	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF9	SMART:SM00733	EnsemblPlantsGene:SORBI_3004G206200	UniParc:UPI0007F23905	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:55697535..55700061

Molecular Weight (calculated)

55527.8 Da

IEP (calculated)

9.423

GRAVY (calculated)

-0.169

Length

492 amino acids

Sequence
(BLAST)

001: MACLEAPQRL ELRPVTCQPR GLQLPSWRLS LPRSPSCRSC TLVSRQLPIC NAQSYADDLW VPAPQSPASV PSRLLAAERE EAKAVLSLFL RQKGLRSTLA
101: ARIVNKSDGF IEHLVSKLQI AYRSRYAEGR ELSTPEIRDA LIPYLEALSK EHGDSLVEVV ENFPDPFSME REALSSSMPF TPTSSNKQKA IARITTATSG
201: GALPELVRYL LDLGMDHEEI KTIVRKFPAF AYYSVDRKIK PLVELLLELG VPKSSIPGII KKRPQLCGIS MSDNLKPMMV YLENIGVNKA QWSKVITRFP
301: ALLTYSRNKV ETTVSFLTEL GVSKKNIGKI LTRCPHLMSY SVDDNLRPTA EYFRSIGADA ASLIQKSPQA FGLNVEAKLK PITEFFLARE FSIEEIGIMA
401: NRFGIIHTLS LEENLLPKYE FFLTMEYPRC ELVKFPQYFG YSLDQRIKPR YARMTGCGVR LILNQMLSVS DDRFEKILEK KKTGFEKTII SD

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.