CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16267	Canola	cytosol	96.94	97.94
Bra036876.1-P	Field mustard	cytosol	97.55	96.96
AT4G14605.2	Thale cress	cytosol	87.14	86.61
KRH39012	Soybean	cytosol	58.57	64.21
KRH57654	Soybean	mitochondrion, plastid	62.04	63.33
KRG94311	Soybean	plastid	60.61	62.79
VIT_14s0171g00230.t01	Wine grape	plastid	62.65	62.02
PGSC0003DMT400052092	Potato	mitochondrion	60.2	60.95
Solyc02g093940.2.1	Tomato	nucleus	59.8	60.54
GSMUA_Achr3P02690_001	Banana	plastid	57.55	54.44
TraesCS6B01G244200.1	Wheat	plastid	49.39	50.0
TraesCS6A01G214200.1	Wheat	plastid	49.39	50.0
TraesCS6D01G196900.1	Wheat	plastid	49.39	49.9
HORVU6Hr1G054650.2	Barley	plastid	48.98	49.38
KXG30576	Sorghum	cytosol	48.98	48.78
Zm00001d017130_P001	Maize	plastid	47.76	48.15
CDY03022	Canola	extracellular	15.71	27.11
CDY45184	Canola	extracellular, mitochondrion	15.71	27.02
CDX99300	Canola	plastid	14.9	26.55
CDX92284	Canola	plastid	14.29	25.45
CDY29073	Canola	cytosol, plastid	17.35	25.37
CDX90610	Canola	cytosol	17.35	25.37
CDX84297	Canola	plastid	15.92	23.64
CDY18308	Canola	plastid	19.18	18.84
CDY14326	Canola	plastid	19.18	18.84
CDY36755	Canola	nucleus, vacuole	16.94	16.84
CDY66686	Canola	extracellular, vacuole	16.73	16.63
CDX79786	Canola	mitochondrion	15.92	15.82
CDY17890	Canola	mitochondrion	15.92	15.66
CDY66820	Canola	plastid	18.78	14.79
CDY13794	Canola	plastid	18.78	14.67
CDY22091	Canola	golgi, mitochondrion, plastid	15.1	13.94
CDY21931	Canola	golgi, mitochondrion, plastid	14.9	13.8

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:A0A078GX63	UniProt:A0A078GX63	EnsemblPlants:CDY29749	ProteinID:CDY29749
ProteinID:CDY29749.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00043594001	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF9	SMART:SM00733	UniParc:UPI0004EE3446	SEG:seg	:	:

Description

BnaA01g19170DBnaA01g19170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX63]

Coordinates

chrLK032243:+:139404..141524

Molecular Weight (calculated)

56120.5 Da

IEP (calculated)

9.465

GRAVY (calculated)

-0.193

Length

490 amino acids

Sequence
(BLAST)

001: MQTFSQLGPS EIFFIARRDN PCTSNCRAQL WFTGKLHFRQ ESFGFRLKNR VEYSARPVPP NLIAAEKEEA KAVLTLFFKK QGLSNSVSVR IINKSDLFID
101: HLVSRLHSVH KARYLVGREL TTLEIRDSLI PYLEQLHEQH GDLLSDLVVS FPDPPPPHAE DRPLSSSSPP ATLAPPHSKK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLEG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIY RFPAILTYSR
301: QKLISTVDFL TQTGLSEEQI GKILTRCPNI MSYSVEDKLR PTMEYFKSLN VDVAVLLHRC PQTFGLSIET NLKPVTEFFL EKGYCIDEIG IMISRYGALY
401: TFSLRENLMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVKRS GVRLLLNQVL SLSGVEFEKV VKKKMMKKLL SDHQSSSELL

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.