CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14270	Soybean	plastid	94.69	93.36
PGSC0003DMT400076662	Potato	cytosol	48.16	80.82
Bra028970.1-P	Field mustard	plastid	63.88	63.62
AT5G55580.1	Thale cress	plastid	64.29	63.51
CDY66686	Canola	extracellular, vacuole	63.88	63.49
CDY36755	Canola	nucleus, vacuole	63.67	63.29
Solyc12g015640.1.1	Tomato	plastid	59.59	60.58
GSMUA_Achr3P29890_001	Banana	plastid	59.59	57.59
VIT_19s0090g01770.t01	Wine grape	plastid	57.35	55.86
EER97446	Sorghum	mitochondrion	57.35	55.53
TraesCS2D01G198500.1	Wheat	plastid	52.04	54.14
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	55.51	54.08
HORVU2Hr1G036490.17	Barley	mitochondrion	54.9	53.48
TraesCS2B01G218100.1	Wheat	plastid	54.29	53.31
TraesCS2A01G189200.1	Wheat	plastid	53.88	52.91
Zm00001d006700_P003	Maize	mitochondrion, plastid	55.51	47.22
KRH40190	Soybean	cytosol	6.73	30.0
KRH74890	Soybean	cytosol, plasma membrane, plastid	13.67	25.28
KRH70749	Soybean	plastid	14.69	24.41
KRH12828	Soybean	plastid	14.08	22.85
KRH43735	Soybean	plastid	15.71	22.78
KRH13722	Soybean	plastid	15.71	22.65
KRH01028	Soybean	plastid	12.24	21.9
KRH19886	Soybean	cytosol	14.9	21.79
KRH37793	Soybean	plastid	14.29	21.74
KRH32500	Soybean	cytosol	14.69	21.49
KRH39012	Soybean	cytosol	16.53	18.12
KRG94311	Soybean	plastid	17.14	17.76
KRH57654	Soybean	mitochondrion, plastid	17.14	17.5
KRH64303	Soybean	nucleus	16.12	15.86
KRH72610	Soybean	plastid	16.73	15.83
KRH60420	Soybean	cytosol	13.06	15.69
KRH41721	Soybean	mitochondrion	15.1	14.83
KRH09594	Soybean	cytosol	17.14	14.19
KRH24469	Soybean	plastid	16.73	13.14
KRH29455	Soybean	mitochondrion	12.65	10.92

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100809638	MapMan:15.6.2.2	UniProt:A0A0R0L3F0	EMBL:ACUP02001288	EnsemblPlantsGene:GLYMA_02G297900
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538
EnsemblPlants:KRH73870	ProteinID:KRH73870	ProteinID:KRH73870.1	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF13	SMART:SM00733	UniParc:UPI0003DED142	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:47527482..47530248

Molecular Weight (calculated)

56994.8 Da

IEP (calculated)

9.924

GRAVY (calculated)

-0.504

Length

490 amino acids

Sequence
(BLAST)

001: MAAILPLYPY NPLLYFSTPS SFRSQFWILE RRRLGSASLK NLVKLAAHSN PRILKSNRKS KYGEALLFYD SDEEMDDDVS DDDEDDDWLS DEEFSEPANL
101: DVNNNKRFKS KTTKGKDRQQ EWEWGLRSFD NKQSIRLPRS ERVASLQRNE SGKLQHSRNV KDKKYPRLSE EIPLDVKWLP LLDYLSTFGM KESHFVQMYE
201: RRMQSLQINV CSAQERLEYL LSVGVKQSDV RRILLRQPQI LEYTVENNLK SRVAFLRGLG IPNSRIGQII AAAPSLFSYS VENSLKPTVR YLIEEVGIKE
301: KDLGKVIQLS PQILVQRIDI SWNTRSMFLT KELGAPRDSI VKMVTKHPQL LHYSIDDGLL PRINFLRSIG MKNSDIVKVL TSLTQVLSLS LEENLKPKYL
401: YLVNELNNEV QSLTKYPMYL SLSLDQRIRP RHRFLVSLKK APKGPFPLGS LVPTDECFCQ QWAGTSLDRY LAFRQRLLLK KFAEKYERKM

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.