Factsheet for VIT_16s0098g00970.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001588	Potato	plastid	14.52	56.56
Solyc03g081300.2.1	Tomato	plastid	13.48	55.28
AT5G54180.1	Thale cress	plastid	13.68	55.2
Bra003005.1-P	Field mustard	plastid	13.38	54.11
CDY14326	Canola	plastid	13.33	53.91
CDY18308	Canola	plastid	13.28	53.71
KRH64303	Soybean	nucleus	12.04	48.8
VIT_03s0063g02460.t01	Wine grape	plastid	3.17	23.19
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	3.87	22.03
VIT_01s0010g03740.t01	Wine grape	plastid	3.17	20.45
VIT_08s0007g02500.t01	Wine grape	plastid	3.42	20.41
VIT_10s0003g04040.t01	Wine grape	plastid	3.52	20.17
VIT_11s0016g02240.t01	Wine grape	mitochondrion	4.56	19.13
VIT_14s0171g00230.t01	Wine grape	plastid	4.41	17.98
VIT_03s0063g02590.t01	Wine grape	cytosol	4.66	16.52
VIT_07s0104g00720.t01	Wine grape	mitochondrion	4.21	16.19
VIT_19s0090g01770.t01	Wine grape	plastid	3.47	13.92
VIT_09s0054g01030.t01	Wine grape	plastid	4.06	13.64

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100264034	wikigene:100264034	EntrezGene:100853857	wikigene:100853857	MapMan:15.6.1.2.3.5
MapMan:15.6.2.2	MapMan:19.4.2.1.3	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30
ProteinID:CCB48089	ProteinID:CCB48089.1	UniProt:F6H766	EMBL:FN595247	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0003824	GO:GO:0004252	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045
InterPro:IPR038538	EntrezGene:LOC100264034	wikigene:LOC100264034	EntrezGene:LOC100853857	wikigene:LOC100853857	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF00082	PFAM:PF02536	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138
PANTHER:PTHR43806	PANTHER:PTHR43806:SF18	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SMART:SM00733	SUPFAM:SSF52743	UniParc:UPI000210A99E
ArrayExpress:VIT_16s0098g00970	EnsemblPlantsGene:VIT_16s0098g00970	EnsemblPlants:VIT_16s0098g00970.t01	RefSeq:XP_003634152	RefSeq:XP_003634152.1	SEG:seg

Description

No Description!

Coordinates

chr16:-:21269961..21283495

Molecular Weight (calculated)

217488.0 Da

IEP (calculated)

7.101

GRAVY (calculated)

0.010

Length

2018 amino acids

Sequence
(BLAST)

0001: MAALLSLLPN PFSSSSSSSS PSLPSVPINT PATPQFSVAL SATSHLHNWV SVINASITRT SQLKTLLLPK CFAINSTISS SDVFNDTGSL FSLFQGLGVD
0101: EREVELLLNK NPALRLASFD CVHERVCSLE SLGINGVALY SLITKCPDVL TAPEIDPLIS FIRDDLEGKI EPAQICRLLK AAEPRFLVGF DGKVRLLVHH
0201: GIPQERIAHV LNNVNLTRAI CLKSAEEIEK TFTFLSRFGA VDIIIKRPAI LNYDLESQLI PRVRVLVELS GGDDAATGVV LRKLPAILRY SEEHLGGHVE
0301: FLRSFAGLSD QEIFKIVCVF PNVFSASKER KLNPRIDFLK QCGLNSYDIF RFLIKAPLFL GLSFEENLVH KLSLLVKIGY QYRTRELAIA MGAVTRTSCE
0401: NLQKVIGLFL SYGLSCEDIV AMSNKHPQIL QYNPTSLKEK IEYLIEDMGR EVDELLAFPA FLGYKLDDRI KHRYEVKKKI IGEGMSLNKL LSVSTERFSR
0501: RKKKDPAHTT ENPSGSKVSV LLILHDQVFF PAAVDAKSNV YIVYMGERQH GNLDLITDGH HRMLSEVLGS DEASVESMVY SYKHGFSGFA AKLTEAQAQM
0601: FAELPDVVQV IPNRLHKLQT TRSWDYLGLP LDSPTSLLHE TKMGDGTIIG LLDTGIWPES EVFSEKGLGP IPSRWNGVCE SGELFHGAKA CNRKLIGARY
0701: LIKGLEAEIG QPFNTTENPD YLSPRDWLGH VRGGAPRARL AMYKVCWNLY GGVCADADIF KGIDEAIHDG VDVLSLSISS DIPLFSHVDQ HDGISIASFH
0801: AVVRGIPVVS AAGNSGPSAE TVSNTAPWII TVAASTMDRL FATHITLGNN QTITGEAVYL GKDTGFTNLA YPEVSDLLAP RYCESLLPND TFAAGNVVLC
0901: FTSDSSHIAA ESVKKAGGLG VIVASNVKND LSSCSQNFPC IQVSNEIGAR ILDYIRSTRH PQVRLSPSRT HLGNPVPTKV ASFSSRGPSS IAPAILKPDI
1001: AGPGFQILGA EPSFVPTSTK YYLMSGTSMA TPHVSGAVAL LRALNREWSP AAIKSAIVTT AWTTDPSGEP VFAEGQPMKL ADPFDFGGGI LNPNGAGNPG
1101: LVYDMGKDDC ILYLCAMGYN NSAIAKVTGR PTSCPCNRPS ILDVNLPSIT IPNLQYSVSL TRSVTNVGAV DSEYNAVIDP PPGVTIKLEP DRLVFNSKIR
1201: TITFRVMVSS ARRVSTGFSF GSLAWSDGEH AVRIPISVRT HTMSSLHHGS LMLIFLASSI LILNEKVSSV SPAQAKSKVH IVYLGKRQHH DPEFITNTHH
1301: EMLTTVLGSK EASVDSMLYS YRHGFSGFAA KLTEAQAQAV SELPDVVQVM PSRLHKLKTT RSWDYLGLSS SHSSTNLLHE TNMGDGIIIG LLDSGIWPES
1401: KVFSDKGLGP IPSRWKGGCS SGQSFNATKH CNRKLIGARY FLKGLEAEIG EPLNTTKYLE YLSPRDALGH GTHTSSIAGG SPVVNASYYG LGFGTVRGGA
1501: PGARLAMYKA CWNLGGGFCS DADILKAFDK AIHDGVDVLS VSLGSDDILF TEIIKPDSIL IGSFHAVAQG ISVVCAAGNG GPSAQTVENT APWILTVAAS
1601: SIDRSFPTPI TLGNNRTVMG QAMLIGNHTG FASLVYPDDP HLQSPSNCLS ISPNDTSVAG KVALCFTSGT VETEFSASFV KAALGLGVII AENSGNTQAS
1701: CISDFPCIKV SYETGSQILH YISSTRHPHV RLSPSKTHVG KPVPTNVAYF SSRGPSFPSP AVLKPDIAGP GAQILGAVPP SDLKKNTEFA FHSGTSMATP
1801: HIAGIVALLK SLHPHWSPAA IKSAIVTTGW TTDPSGEPIF AEGDPTKLAD PFDFGGGIVN PNRAADPGLV YDMGTADYIH YLCTLGYNNS AIFQFTEQSI
1901: RCPTREHSIL DLNLPSITIP SLQNSTSLTR NVTNVGAVNS TYKASIISPA GTTITVKPDT LIFDSTIKTV TFSVTVSSIQ QVNTGYSFGS LTWIDGVHAV
2001: RSPISVRTMI KESYANDS

Best Arabidopsis Sequence Match ( AT1G32960.1 )
(BLAST)

001: MRSFRSSILL VLLSLITVLN ATRARSETES KVHIVYLGEK KHHDPEFVTE SHHQMLASLL GSKKDADDSM VYSYRHGFSG FAAKLTKSQA KKIADLPEVV
101: HVIPDGFHEL ATTRTWEYLG LSSANPKNLL NDTNMGDQVI IGVIDTGVWP ESESFNDNGV GPIPRKWKGG CESGENFRST DCNRKLIGAK YFINGFLAEN
201: KGFNTTESRD YISARDFDGH GTHVASIAGG SFVPNVSYKG LAGGTLRGGA PRARIAMYKA CWFHEELKGV TCSDSDIMKA IDEAIHDGVD VLSISLVGQI
301: PLNSETDIRD EFATGLFHAV AKGIVVVCAG GNDGPAAQTV VNIAPWILTV AATTLDRSFP TPITLGNNKV ILGQATYTGP ELGLTSLVYP ENARNNNETF
401: SGVCESLNLN PNYTMAMKVV LCFTASRTNA AISRAASFVK AAGGLGLIIS RNPVYTLSPC NDDFPCVAVD YELGTDILSY IRSTRSPVVK IQRSRTLSGQ
501: PVGTKVVNFS SRGPNSMSPA ILKPDIAAPG VRILAATSPN DTLNVGGFAM LSGTSMATPV ISGVIALLKA LHPEWSPAAF RSAIVTTAWR TDPFGEQIFA
601: EGSSRKVSDP FDYGGGIVNP EKAAEPGLIY DMGPQDYILY LCSAGYNDSS ISQLVGQITV CSNPKPSVLD VNLPSITIPN LKDEVTLTRT VTNVGLVDSV
701: YKVSVEPPLG VRVVVTPETL VFNSKTISVS FTVRVSTTHK INTGYYFGSL TWTDSVHNVV IPLSVRTQIL QNYYDEN

Arabidopsis Description

SBT3.3Subtilisin-like protease SBT3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAP5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.