Factsheet for PGSC0003DMT400001588

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g081300.2.1	Tomato	plastid	91.7	96.54
AT5G54180.1	Thale cress	plastid	50.58	52.4
Bra003005.1-P	Field mustard	plastid	49.81	51.7
CDY14326	Canola	plastid	49.81	51.7
CDY18308	Canola	plastid	49.81	51.7
KRH64303	Soybean	nucleus	44.79	46.59
PGSC0003DMT400047490	Potato	mitochondrion	4.83	26.6
PGSC0003DMT400075363	Potato	cytosol	10.23	25.48
PGSC0003DMT400076662	Potato	cytosol	12.93	22.95
PGSC0003DMT400047424	Potato	plastid	13.71	22.33
PGSC0003DMT400059549	Potato	cytosol	13.71	21.65
PGSC0003DMT400085903	Potato	plastid	12.74	20.62
PGSC0003DMT400080487	Potato	plastid	11.97	20.0
PGSC0003DMT400001905	Potato	plastid	10.62	19.57
PGSC0003DMT400052092	Potato	mitochondrion	16.41	17.56
PGSC0003DMT400023814	Potato	mitochondrion	16.02	16.87
PGSC0003DMT400007420	Potato	mitochondrion	14.86	16.14
VIT_16s0098g00970.t01	Wine grape	plastid	56.56	14.52
PGSC0003DMT400023772	Potato	plastid	15.25	13.23
PGSC0003DMT400001916	Potato	plastid	16.02	12.05

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:102588461	MapMan:15.6.1.2.3.5	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009536	GO:GO:0009987	InterPro:IPR038538
UniProt:M0ZIR3	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	EnsemblPlantsGene:PGSC0003DMG400000587	PGSC:PGSC0003DMG400000587
EnsemblPlants:PGSC0003DMT400001588	PANTHER:PTHR13068	PANTHER:PTHR13068:SF32	SMART:SM00733	UniParc:UPI000296AA2A	RefSeq:XP_006347515.1
SEG:seg	:	:	:	:	:

Description

PTAC15 [Source:PGSC_GENE;Acc:PGSC0003DMG400000587]

Coordinates

chr3:-:47493172..47495493

Molecular Weight (calculated)

58082.1 Da

IEP (calculated)

8.846

GRAVY (calculated)

0.010

Length

518 amino acids

Sequence
(BLAST)

001: MSTPTKSFPL SPSPSCLSRA LSPPIRTLFP SALLPSQKLT FSLQKQDKLP LHFLVPQDST LLLLKCNALA INNSSTNSFV DSGVMLFSLF REIGFNETDT
101: EALLDAHPAI NLTPFESIRT RIHSLQSLGV SGLALSRLIV KRPDVLTAVE IDGLVSFLLK GDLELAGKIK SSQIEHLLNS TEPRFLAGFE TKVRLLLELG
201: ITQETIVHVL NNANLTKAFC LKSFEDIERM LTFLNRFGGG DLILRRPALL NYDLDAQLIP RVGFLLELSG GDETGTATVL RKLPFVVAYS VDHLKDHVEF
301: LKSYAGLSEE EIFRIVLVYP NMFSASRKRK LHPRIDFLKQ CGLSSHDIFR FLIKAPLFLS LSFEGNLAYK LVFLVKIGYK KNTKELAMAM GAVTRTSCKN
401: MQEVIGVFLN YGLTFDDILE MSMKHPQVLQ YNHESLEEKM DYLVEEMGRE VGELLAFPAF LGYKLDGRIK HRYEEKRKIL GEGMSLNKLL SVSAARFSTK
501: SKRKQRVPAV SGLDESDE

Best Arabidopsis Sequence Match ( AT5G54180.1 )
(BLAST)

001: MVILSLVSCS FSVFSPPISL RLHLPPVTSL CSHGTFPASS TFRSQLQPLL ISCLNHREPA LTFRCSCLSS PIESGSQIES LFSLFRDIGF IEEETEMILA
101: KNPDIKSTSL DKIGARVASL QSLKINGFPL QGLIAKCPNL LTSEEFDLVI SFLVDELEGR LDPELVERLL SVVDTSILLS FNQKVRLLLL HGIPKEKISH
201: VLNKVYLNKL LYQKSVEDIE RLISFLEPFG GIGIIARRPV ILNSDLDSQL IPRVDFIRNL SGEDDFATGT VLRRLPAILS YSVEHMNGQV EFLKSFAGLT
301: SEQVFKIVHV FPNVISTSKE RKLRPRIEFL KECGFDSPGM FKFLSKAPLI LALSENNLSH KLGFLVKIGY KHRTKELAFA MGAVTRTSSD NMQRVIGLYL
401: SYGLSFEDIL AMSTKHPQVL QYNYTSLEEK LEYLIEYMGR EVEELLAFPA FLGYKLDSRI KHRYEEKLKS RGENMSLNKL LTVSAERFSK AADNIEMICL

Arabidopsis Description

MTERF8PTAC15 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Y7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.