Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58036 | Soybean | cytosol | 94.05 | 93.33 |
| KRH77069 | Soybean | cytosol | 81.48 | 81.09 |
| KRH28408 | Soybean | cytosol | 45.59 | 69.34 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 70.54 | 68.82 |
| Solyc02g092780.1.1 | Tomato | nucleus | 69.0 | 68.15 |
| CDX75658 | Canola | cytosol | 60.75 | 62.06 |
| CDX69309 | Canola | cytosol | 60.84 | 61.97 |
| CDX72630 | Canola | mitochondrion | 6.33 | 61.68 |
| Bra011768.1-P | Field mustard | cytosol | 61.04 | 61.51 |
| AT4G37460.1 | Thale cress | cytosol | 60.17 | 59.6 |
| CDY29552 | Canola | plasma membrane | 12.86 | 59.56 |
| Bra017825.1-P | Field mustard | plasma membrane | 12.86 | 59.56 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 55.57 | 57.16 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 55.28 | 57.14 |
| TraesCS2B01G279000.1 | Wheat | cytosol | 55.09 | 56.94 |
| Os07t0113700-01 | Rice | cytosol | 55.09 | 56.78 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 54.7 | 56.55 |
| HORVU2Hr1G063340.8 | Barley | plastid | 55.09 | 54.98 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 54.51 | 53.89 |
| CDY06838 | Canola | cytosol | 4.13 | 51.81 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 27.26 | 47.73 |
| GSMUA_Achr5P01500_001 | Banana | cytosol | 9.4 | 33.68 |
| CDY06839 | Canola | cytosol | 3.07 | 33.33 |
| TraesCS2B01G273000.1 | Wheat | plastid | 3.55 | 27.41 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100815327 | MapMan:35.1 | EMBL:ACUP02010420 | EnsemblPlantsGene:GLYMA_17G164600 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | UniProt:I1MVQ3 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| EnsemblPlants:KRH04486 | ProteinID:KRH04486 | ProteinID:KRH04486.1 | PFAM:PF00515 | PFAM:PF13176 | PFAM:PF13181 |
| PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44749 | SMART:SM00028 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | UniParc:UPI000233F52A | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:14781161..14794536
Molecular Weight (calculated)
117141.0 Da
IEP (calculated)
6.543
GRAVY (calculated)
-0.422
Length
1042 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPATSERVE LARLCASKDW SKAIRILDSL VSHSNAIQDL CNRAFCYSKL ELHKHVIKDC DRALQLDPTL LQAYILKGSA LSVLGRKENA LLVWEQGYEH
0101: ALHQSADLKQ LLELEELIAT AKQGNNTLCE SETHRSLPQT KSVSLSNGSS SETCKIQDTL GTRAELCGDA TGDKSETCLK SADNSNLKHE SHDEYRESNK
0201: SDGQVNGSPD VLDTLSYNSE SCNDSSDASE SSDKVSTNSG DSANVPKIFR NPISKFIFSD ERKGEARKNK KFCVARISNT NSISVDFRLS RGIAEVNEGK
0301: YAHAISIFDQ ILKKDPAYPE ALIGRGTAYA FQRELDAAIA DFTKAIQFNP LAGEAWKRRG QARAALGEFV EAIEDLTKAL EFEPDTADIL HERGIVNFKF
0401: KEFDAAVEDL SACVKLDKDN TSAYTYLGLA LSSIGEYKEA EEAHLKSLQL DKNFLEAWAH LTQFYQDLAK PTKAQECINR MLHIDGRFAR AYHLRGLLFH
0501: AMGEHRKAIK DLTMGLSIDG SNIECLYLRA SCYHAVGQYK EAVKDYDAAL DLELDSMDKF VLQCLVFYQK EIALYTASKF NGDFCWFDID GDIDALFKEY
0601: WCKKLHPKNV CEKVFRQPPL RESLRKGKLK KQEFTITKQK AALLQASDSI GMKIQYDCPG FLPNRRQHRM AGLAAIEIAQ KVSKAWRSLH AEWKYSNKGN
0701: SKNGRRARRR ERINMPSQNR GGAGCSTSST SVTSSNGTVD DRLSSRTFSW HNVYSLAVRW RQISEPCDPV VWVNKLSDEF NAGFGSHTPM ILGQARVVRY
0801: FPNYERTLEI AKTVMKERSF VRSKTDKIIH LSEDGKLEEI MHAKSCSDLY KVIGEDFWLA TWCNSTAFEG KQLEGTRINL VKMGEHGFDF AIKTPCTPAR
0901: WEDFDEEMTV AWETLCNAYC GENYGSTDFD TLENVRDAIL RMTYYWYNFM PLSRGSAGVG FIVMLGLLLA ANMEFTGSIP QGLQVDWEAI LNLDPNSFVD
1001: SVKTWLYPSL KVTTSWKDYP DIASTFATTG SAIAALNFSF DD
0101: ALHQSADLKQ LLELEELIAT AKQGNNTLCE SETHRSLPQT KSVSLSNGSS SETCKIQDTL GTRAELCGDA TGDKSETCLK SADNSNLKHE SHDEYRESNK
0201: SDGQVNGSPD VLDTLSYNSE SCNDSSDASE SSDKVSTNSG DSANVPKIFR NPISKFIFSD ERKGEARKNK KFCVARISNT NSISVDFRLS RGIAEVNEGK
0301: YAHAISIFDQ ILKKDPAYPE ALIGRGTAYA FQRELDAAIA DFTKAIQFNP LAGEAWKRRG QARAALGEFV EAIEDLTKAL EFEPDTADIL HERGIVNFKF
0401: KEFDAAVEDL SACVKLDKDN TSAYTYLGLA LSSIGEYKEA EEAHLKSLQL DKNFLEAWAH LTQFYQDLAK PTKAQECINR MLHIDGRFAR AYHLRGLLFH
0501: AMGEHRKAIK DLTMGLSIDG SNIECLYLRA SCYHAVGQYK EAVKDYDAAL DLELDSMDKF VLQCLVFYQK EIALYTASKF NGDFCWFDID GDIDALFKEY
0601: WCKKLHPKNV CEKVFRQPPL RESLRKGKLK KQEFTITKQK AALLQASDSI GMKIQYDCPG FLPNRRQHRM AGLAAIEIAQ KVSKAWRSLH AEWKYSNKGN
0701: SKNGRRARRR ERINMPSQNR GGAGCSTSST SVTSSNGTVD DRLSSRTFSW HNVYSLAVRW RQISEPCDPV VWVNKLSDEF NAGFGSHTPM ILGQARVVRY
0801: FPNYERTLEI AKTVMKERSF VRSKTDKIIH LSEDGKLEEI MHAKSCSDLY KVIGEDFWLA TWCNSTAFEG KQLEGTRINL VKMGEHGFDF AIKTPCTPAR
0901: WEDFDEEMTV AWETLCNAYC GENYGSTDFD TLENVRDAIL RMTYYWYNFM PLSRGSAGVG FIVMLGLLLA ANMEFTGSIP QGLQVDWEAI LNLDPNSFVD
1001: SVKTWLYPSL KVTTSWKDYP DIASTFATTG SAIAALNFSF DD
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.