Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G279000.1 | Wheat | cytosol | 99.11 | 99.11 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 98.71 | 98.71 |
| HORVU2Hr1G063340.8 | Barley | plastid | 97.82 | 94.44 |
| Os07t0113700-01 | Rice | cytosol | 86.21 | 85.95 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 85.62 | 85.19 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 83.93 | 80.27 |
| GSMUA_Achr5P01510_001 | Banana | cytosol | 7.34 | 79.57 |
| Solyc02g092780.1.1 | Tomato | nucleus | 59.23 | 56.59 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 58.93 | 55.62 |
| KRH77069 | Soybean | cytosol | 57.44 | 55.3 |
| KRH04486 | Soybean | cytosol | 56.55 | 54.7 |
| KRH58036 | Soybean | cytosol | 56.75 | 54.48 |
| CDX75658 | Canola | cytosol | 54.66 | 54.02 |
| Bra011768.1-P | Field mustard | cytosol | 54.86 | 53.48 |
| CDX69309 | Canola | cytosol | 54.17 | 53.37 |
| CDX72630 | Canola | mitochondrion | 5.65 | 53.27 |
| CDY06838 | Canola | cytosol | 4.27 | 51.81 |
| AT4G37460.1 | Thale cress | cytosol | 53.77 | 51.52 |
| Bra017825.1-P | Field mustard | plasma membrane | 11.41 | 51.11 |
| CDY29552 | Canola | plasma membrane | 11.41 | 51.11 |
| KRH28408 | Soybean | cytosol | 31.55 | 46.42 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 24.11 | 40.84 |
| CDY06839 | Canola | cytosol | 3.08 | 32.29 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G263200.1 | EnsemblPlantsGene:TraesCS2A01G263200 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| PANTHER:PTHR44749 | PFAM:PF13181 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | SEG:seg |
| SMART:SM00028 | SUPFAM:SSF48452 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:416916983..416927814
Molecular Weight (calculated)
112440.0 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.376
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSDRGELAR LCSGRNWSKA IRLLDSILAR SPSSXXXXXN RAFCYFQLEL HKHVVKDCDR ALQLDPALLQ AYVLKGKALC ALGKNEEALV AWEQGHEIAV
0101: RDTIDLKQLL ELEELVSSVK IYETVECEDV VDASPCDTKV VISEDRFINT SFTAATTDTK TVVCEENTAN SKSLSNSDAL LPNNSKDHKD SVSPAKDTTV
0201: THQTPKKQPK TDKKNKAKVK KETNGQAEDV EERRSSDETI TLDQALFATK VSKSSKSISL DFRLSRGIAQ VNEGRYDQAI SIFDQILRET PTYPEALIGR
0301: GTAYAFQREL DSAISDFTKA IQSNPSAGEA WKRRGQARAA LGEFVEAIDD LTKALEFEPN SPDILHERGI VNFKFKDYNS AVEDLSTCVK RDKKNSSAHT
0401: YLGLTLSAVG EYKRAEDEHL LGIKYDGSFL DSWAHLSQLY LDLAYPEKML DNLEKVLQID SRFSKAYHLR GILYHGMGRH RSAIKELSTA LTLDASSIEC
0501: LYLRASCHHA IGEYKAAIKD YDDVLDLELD SMDKFVLQCL AFYQKEIALY TASKANLEFS QFNIDDDVDP LFKEYWCKRL HPKNVAEKVY RQPPLRISLR
0601: SGRLNKQDFK FTKHQTSLLL AADSIGKKIQ YNCRGFLPNQ RQYRMAGLAA IEIAQKVSKA WRFLRNPKNS AKLVRRRDKH NMSVNRGGYC STSTLSAGSP
0701: TSSPSEERVS SGISLSWQDV YNIAVKWRQI SEPCDPVVWV NKLSEEFNSG FGSHTPLLLG QAKIVRYYPY YLRTLEAAKT IMLDLKYVNN AEDRAIFLTD
0801: IEKLKNIEVA SSCSDLYNVV GETYWVATRC DSIAFQGRRL EGTRITTQNV GKTGFDFAIR TPCTPSRWEE YQEEMTAAWE AICEAYCSDP NPTRDSNALD
0901: AVKASILRMT YYWYNFMPLS RGSSVVGYVV LLGLFLAASM DVTASIPPGV QVDWEAILSP DPGTFVDAVK PWLYPSVKMS KSLKDYADVS VAFGTTGSVV
1001: AALTSADT
0101: RDTIDLKQLL ELEELVSSVK IYETVECEDV VDASPCDTKV VISEDRFINT SFTAATTDTK TVVCEENTAN SKSLSNSDAL LPNNSKDHKD SVSPAKDTTV
0201: THQTPKKQPK TDKKNKAKVK KETNGQAEDV EERRSSDETI TLDQALFATK VSKSSKSISL DFRLSRGIAQ VNEGRYDQAI SIFDQILRET PTYPEALIGR
0301: GTAYAFQREL DSAISDFTKA IQSNPSAGEA WKRRGQARAA LGEFVEAIDD LTKALEFEPN SPDILHERGI VNFKFKDYNS AVEDLSTCVK RDKKNSSAHT
0401: YLGLTLSAVG EYKRAEDEHL LGIKYDGSFL DSWAHLSQLY LDLAYPEKML DNLEKVLQID SRFSKAYHLR GILYHGMGRH RSAIKELSTA LTLDASSIEC
0501: LYLRASCHHA IGEYKAAIKD YDDVLDLELD SMDKFVLQCL AFYQKEIALY TASKANLEFS QFNIDDDVDP LFKEYWCKRL HPKNVAEKVY RQPPLRISLR
0601: SGRLNKQDFK FTKHQTSLLL AADSIGKKIQ YNCRGFLPNQ RQYRMAGLAA IEIAQKVSKA WRFLRNPKNS AKLVRRRDKH NMSVNRGGYC STSTLSAGSP
0701: TSSPSEERVS SGISLSWQDV YNIAVKWRQI SEPCDPVVWV NKLSEEFNSG FGSHTPLLLG QAKIVRYYPY YLRTLEAAKT IMLDLKYVNN AEDRAIFLTD
0801: IEKLKNIEVA SSCSDLYNVV GETYWVATRC DSIAFQGRRL EGTRITTQNV GKTGFDFAIR TPCTPSRWEE YQEEMTAAWE AICEAYCSDP NPTRDSNALD
0901: AVKASILRMT YYWYNFMPLS RGSSVVGYVV LLGLFLAASM DVTASIPPGV QVDWEAILSP DPGTFVDAVK PWLYPSVKMS KSLKDYADVS VAFGTTGSVV
1001: AALTSADT
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.