Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75658 | Canola | cytosol | 94.29 | 95.59 |
| AT4G37460.1 | Thale cress | cytosol | 82.11 | 80.7 |
| Bra017825.1-P | Field mustard | plasma membrane | 16.44 | 75.56 |
| Solyc02g092780.1.1 | Tomato | nucleus | 63.06 | 61.8 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 63.73 | 61.7 |
| KRH77069 | Soybean | cytosol | 61.9 | 61.13 |
| KRH04486 | Soybean | cytosol | 61.51 | 61.04 |
| KRH58036 | Soybean | cytosol | 61.51 | 60.57 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 53.87 | 55.26 |
| TraesCS2B01G279000.1 | Wheat | cytosol | 53.77 | 55.16 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 53.48 | 54.86 |
| Os07t0113700-01 | Rice | cytosol | 53.29 | 54.5 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 53.0 | 54.1 |
| HORVU2Hr1G063340.8 | Barley | plastid | 53.58 | 53.07 |
| KRH28408 | Soybean | cytosol | 33.95 | 51.24 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 51.74 | 50.76 |
| GSMUA_Achr5P01500_001 | Banana | cytosol | 9.28 | 32.99 |
| TraesCS2B01G273000.1 | Wheat | plastid | 3.87 | 29.63 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EnsemblPlantsGene:Bra011768 | EnsemblPlants:Bra011768.1 | EnsemblPlants:Bra011768.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009816 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031348 | GO:GO:0042742 | GO:GO:0043231 |
| GO:GO:0048471 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M4D5L1 | PFAM:PF13181 |
| PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44749 | SMART:SM00028 | SUPFAM:SSF48452 |
| TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00025465FA | SEG:seg |
Description
AT4G37460 (E=0.0) SRFR1 | SRFR1 (SUPPRESSOR OF RPS4-RLD 1); protein complex scaffold
Coordinates
chrA01:+:656434..662546
Molecular Weight (calculated)
115446.0 Da
IEP (calculated)
7.316
GRAVY (calculated)
-0.371
Length
1034 amino acids
Sequence
(BLAST)
(BLAST)
0001: METAAASERV ELAKHCSSRN WSKAIRVLDS LLAKQCSILD ICNRAFCYNQ LELHKHVIKD CDKALQLDSC AIQAYLLKGR ALLALGRKQE ALLVLEQGYN
0101: IALQQTSDVK QLLELDELLN AARPEIDVTL NHLAAETPVS SCATQKIDNC QVSTSMAVSE SGACSNGNTH ELGEKSMDAS KLSGGASELR NGLAYKEKES
0201: VKSGSQINGK PSSNGSDLSE TSDRLGDLSV IGNKFSSKSG SVSKQSLTAE ARSGGSNETK INNNKCTIAR ISETHSISVD FRLSRGIAQV NEGNYMKAIS
0301: IFDKVLKEEP TYPEALIGRG TAYAFQRDLE NAIDDFTKAI QSNPAAGEAW KRRGQARAAL GEFAEAVEDL TRALELEPKS PDILHERGII NFRSKDFTAA
0401: VKDLSICLKQ EKDNKSAYTY LGLAFASLGE YTKAEEAHLK SIQLDSNYLE AWLHLAQFYQ ELADHNKALE CIDQVLQVDN RVWKAYHLRG LVFHGLGEHR
0501: KAIQELSIGL TIESSIECLY LRGSCHHAVG EYREAVKDYD ATVDVELDAV EKFVLQCLAF YQKELALYTA SKVSSEFFCF DIDGDIDPMF KEYWCKRLHP
0601: KDVCEKVYRQ PPLRESLKKG KLKKQDLAIT KPKANLLRFT DMIGKKIQYF CPGFLPNRRQ HRMAGLAVLE IAQKVSKAWR IEWRNSNKGT AKNGKKNRRR
0701: ERINMLSQNR GGAGCSTSTS SETSTGYASL EDRSSGRSIL SWQDVYSSAV RWRQISEPCD PVVWVNKLSE EFNSGFGSHT PMVLGQAKVI RYFPNYERTL
0801: NLAKTIIKEK LCVRSKADKV IDLSKDEKIE EIMRAETCEE LHKIVGEDFW VATWCHSTAF EGKRLEGTRI TCIKKPGSLG YDFAIRTPCT PARWSDFDEE
0901: MTSAWEALCN AYCGENYGST NLQALETVRD AILRMTYYWY NFMPLARGTA VTGFVVLLGL LLAANMEFTE SIPKGLQIDW EAILSVEPGS FVGSVKSWLY
1001: PSLKINTSWK DHQEVSSAFS TTGSVVAALS TYND
0101: IALQQTSDVK QLLELDELLN AARPEIDVTL NHLAAETPVS SCATQKIDNC QVSTSMAVSE SGACSNGNTH ELGEKSMDAS KLSGGASELR NGLAYKEKES
0201: VKSGSQINGK PSSNGSDLSE TSDRLGDLSV IGNKFSSKSG SVSKQSLTAE ARSGGSNETK INNNKCTIAR ISETHSISVD FRLSRGIAQV NEGNYMKAIS
0301: IFDKVLKEEP TYPEALIGRG TAYAFQRDLE NAIDDFTKAI QSNPAAGEAW KRRGQARAAL GEFAEAVEDL TRALELEPKS PDILHERGII NFRSKDFTAA
0401: VKDLSICLKQ EKDNKSAYTY LGLAFASLGE YTKAEEAHLK SIQLDSNYLE AWLHLAQFYQ ELADHNKALE CIDQVLQVDN RVWKAYHLRG LVFHGLGEHR
0501: KAIQELSIGL TIESSIECLY LRGSCHHAVG EYREAVKDYD ATVDVELDAV EKFVLQCLAF YQKELALYTA SKVSSEFFCF DIDGDIDPMF KEYWCKRLHP
0601: KDVCEKVYRQ PPLRESLKKG KLKKQDLAIT KPKANLLRFT DMIGKKIQYF CPGFLPNRRQ HRMAGLAVLE IAQKVSKAWR IEWRNSNKGT AKNGKKNRRR
0701: ERINMLSQNR GGAGCSTSTS SETSTGYASL EDRSSGRSIL SWQDVYSSAV RWRQISEPCD PVVWVNKLSE EFNSGFGSHT PMVLGQAKVI RYFPNYERTL
0801: NLAKTIIKEK LCVRSKADKV IDLSKDEKIE EIMRAETCEE LHKIVGEDFW VATWCHSTAF EGKRLEGTRI TCIKKPGSLG YDFAIRTPCT PARWSDFDEE
0901: MTSAWEALCN AYCGENYGST NLQALETVRD AILRMTYYWY NFMPLARGTA VTGFVVLLGL LLAANMEFTE SIPKGLQIDW EAILSVEPGS FVGSVKSWLY
1001: PSLKINTSWK DHQEVSSAFS TTGSVVAALS TYND
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.