Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G279000.1 | Wheat | cytosol | 95.11 | 98.51 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 94.73 | 98.12 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 94.44 | 97.82 |
| Os07t0113700-01 | Rice | cytosol | 83.81 | 86.55 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 83.05 | 85.59 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 81.42 | 80.65 |
| GSMUA_Achr5P01510_001 | Banana | cytosol | 7.09 | 79.57 |
| Solyc02g092780.1.1 | Tomato | nucleus | 57.57 | 56.97 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 57.18 | 55.9 |
| KRH77069 | Soybean | cytosol | 55.75 | 55.59 |
| KRH58036 | Soybean | cytosol | 55.56 | 55.24 |
| KRH04486 | Soybean | cytosol | 54.98 | 55.09 |
| CDX75658 | Canola | cytosol | 52.78 | 54.02 |
| Bra011768.1-P | Field mustard | cytosol | 53.07 | 53.58 |
| CDX69309 | Canola | cytosol | 52.39 | 53.47 |
| CDX72630 | Canola | mitochondrion | 5.46 | 53.27 |
| CDY06838 | Canola | cytosol | 4.21 | 53.01 |
| AT4G37460.1 | Thale cress | cytosol | 52.11 | 51.71 |
| CDY29552 | Canola | plasma membrane | 11.11 | 51.56 |
| Bra017825.1-P | Field mustard | plasma membrane | 11.11 | 51.56 |
| KRH28408 | Soybean | cytosol | 30.65 | 46.72 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 23.37 | 41.01 |
| CDY06839 | Canola | cytosol | 2.78 | 30.21 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G063340.8 | EnsemblPlantsGene:HORVU2Hr1G063340 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| PANTHER:PTHR44749 | PFAM:PF13181 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | SEG:seg |
| SMART:SM00028 | SUPFAM:SSF48452 | UniParc:UPI000B474095 | UniProt:A0A287I700 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr2H:-:427124047..427135439
Molecular Weight (calculated)
116938.0 Da
IEP (calculated)
7.335
GRAVY (calculated)
-0.367
Length
1044 amino acids
Sequence
(BLAST)
(BLAST)
0001: SSEQVRWPPS ILKSSPPPLI RSFPHPDLLR RPIAAAMGSD RGELARLCSG RNWSKAIRLL DSILARSPSS IHDLCNRAFC YFQLELHKHV VKDCDRALQL
0101: DPALLQAYVL KGKALCALGK NEEALVAWEQ GHEIAVRDTI DLKQLLELEE LVSSVKIYET VECEDVVDAS PCDTKVVISE DRFVNTSFTA ATTDTKTVVC
0201: EENTANSKSS SNSDVLLPNN SKDHKDSISP AKDTTATHQT PKKQPKPDKK NKAKVKKETN GQAEDVEERR SSDETIPLNQ ALFATKVSKS SKSISLDFRL
0301: SRGIAQVNEG RYDQAISIFD QILRETPTYP EALIGRGTAY AFQRELDSAI SDFTKAIQSN PSAGEAWKRR GQARAALGEF VEAIDDLTKA LEFEPNSPDI
0401: LHERGIVNFK FKDYNSAVED LSTCVKRDKK NSSAHTYLGL TLSAVGEYKR AEDEHLLGIK YDGSFLDSWA HLSQLYLDLA YPEKMMDNLE KVIQIDSRFS
0501: KAYHLRGILY HGMGRHRSAI KDLSTALTLD ASSIECLYLR ASCHHAIGEY KSAIKDYDDV LDLELDSMDK FVLQCLAFYQ KEIALYTASK ANLEFSQFNI
0601: DDDVDPLFKE YWCKRLHPKN VAEKVYRQPP LRISLRSGRL NKQDFKFTKH QTSLLLAADS IGKKIQYNCR GFLPNQRQYR MAGLAAIEIA QKVSKAWRFL
0701: RNPKNSAKLV RRRDKLNMSV NRGGYCSTST LSAGSPTASP SEERVSSGIS LSWQDVYNIA VKWRQISEPC DPVVWVNKLS EEFNSGFGSH TPLLLGQAKI
0801: VRYYPYYLRT LEAAKTIMLD LKYVNNAEDR AIFLTDIETL KKIEVASSCS DLYNVVGETY WVATRCDSIA FQGRRLEGTR ITTQNVGKTG FDFAIRTPCT
0901: PSRWEEYQEE MTAAWEAICE AYCSDPNPTR DSNALDAVKA AILRMTYYWY NFMPLSRGSS VVGYVVLLGL FLAASMDVTA SIPPGVQVDW EAILSPDPGT
1001: FVDAVKPWLY PSVKMSKSLK DYADVSVAFG TTGSVVAALT SADT
0101: DPALLQAYVL KGKALCALGK NEEALVAWEQ GHEIAVRDTI DLKQLLELEE LVSSVKIYET VECEDVVDAS PCDTKVVISE DRFVNTSFTA ATTDTKTVVC
0201: EENTANSKSS SNSDVLLPNN SKDHKDSISP AKDTTATHQT PKKQPKPDKK NKAKVKKETN GQAEDVEERR SSDETIPLNQ ALFATKVSKS SKSISLDFRL
0301: SRGIAQVNEG RYDQAISIFD QILRETPTYP EALIGRGTAY AFQRELDSAI SDFTKAIQSN PSAGEAWKRR GQARAALGEF VEAIDDLTKA LEFEPNSPDI
0401: LHERGIVNFK FKDYNSAVED LSTCVKRDKK NSSAHTYLGL TLSAVGEYKR AEDEHLLGIK YDGSFLDSWA HLSQLYLDLA YPEKMMDNLE KVIQIDSRFS
0501: KAYHLRGILY HGMGRHRSAI KDLSTALTLD ASSIECLYLR ASCHHAIGEY KSAIKDYDDV LDLELDSMDK FVLQCLAFYQ KEIALYTASK ANLEFSQFNI
0601: DDDVDPLFKE YWCKRLHPKN VAEKVYRQPP LRISLRSGRL NKQDFKFTKH QTSLLLAADS IGKKIQYNCR GFLPNQRQYR MAGLAAIEIA QKVSKAWRFL
0701: RNPKNSAKLV RRRDKLNMSV NRGGYCSTST LSAGSPTASP SEERVSSGIS LSWQDVYNIA VKWRQISEPC DPVVWVNKLS EEFNSGFGSH TPLLLGQAKI
0801: VRYYPYYLRT LEAAKTIMLD LKYVNNAEDR AIFLTDIETL KKIEVASSCS DLYNVVGETY WVATRCDSIA FQGRRLEGTR ITTQNVGKTG FDFAIRTPCT
0901: PSRWEEYQEE MTAAWEAICE AYCSDPNPTR DSNALDAVKA AILRMTYYWY NFMPLSRGSS VVGYVVLLGL FLAASMDVTA SIPPGVQVDW EAILSPDPGT
1001: FVDAVKPWLY PSVKMSKSLK DYADVSVAFG TTGSVVAALT SADT
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.