Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77069 | Soybean | cytosol | 69.94 | 71.35 |
| KRH04486 | Soybean | cytosol | 68.82 | 70.54 |
| Solyc02g092780.1.1 | Tomato | nucleus | 69.29 | 70.14 |
| KRH58036 | Soybean | cytosol | 68.16 | 69.33 |
| CDX69309 | Canola | cytosol | 61.8 | 64.52 |
| CDX75658 | Canola | cytosol | 61.61 | 64.51 |
| Bra011768.1-P | Field mustard | cytosol | 61.7 | 63.73 |
| CDX72630 | Canola | mitochondrion | 6.37 | 63.55 |
| CDY29552 | Canola | plasma membrane | 13.3 | 63.11 |
| Bra017825.1-P | Field mustard | plasma membrane | 13.3 | 63.11 |
| AT4G37460.1 | Thale cress | cytosol | 61.33 | 62.26 |
| KRH28408 | Soybean | cytosol | 39.79 | 62.04 |
| Os07t0113700-01 | Rice | cytosol | 56.55 | 59.74 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 56.18 | 59.23 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 55.9 | 59.23 |
| TraesCS2B01G279000.1 | Wheat | cytosol | 55.9 | 59.23 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 55.62 | 58.93 |
| HORVU2Hr1G063340.8 | Barley | plastid | 55.9 | 57.18 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 54.78 | 55.5 |
| CDY06838 | Canola | cytosol | 4.03 | 51.81 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 27.72 | 49.75 |
| CDY06839 | Canola | cytosol | 3.28 | 36.46 |
| GSMUA_Achr5P01500_001 | Banana | cytosol | 9.46 | 34.71 |
| TraesCS2B01G273000.1 | Wheat | plastid | 4.21 | 33.33 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100264606 | wikigene:100264606 | MapMan:35.1 | ProteinID:CCB57764 | ProteinID:CCB57764.1 |
| UniProt:F6HSV4 | EMBL:FN596246 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | EntrezGene:LOC100264606 |
| wikigene:LOC100264606 | PFAM:PF13181 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44749 |
| SMART:SM00028 | SUPFAM:SSF48452 | TIGR:TC65078 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI00019839E3 | ArrayExpress:VIT_07s0129g00540 | EnsemblPlantsGene:VIT_07s0129g00540 | EnsemblPlants:VIT_07s0129g00540.t01 | unigene:Vvi.11104 |
| RefSeq:XP_002279290 | RefSeq:XP_002279290.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:+:15768417..15796141
Molecular Weight (calculated)
120632.0 Da
IEP (calculated)
6.136
GRAVY (calculated)
-0.508
Length
1068 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESAISERQE LAKLCSCRDW SKAIRVLDSL LAQSCVIQDI CNRAFCYSKL ELHKHVIRDC DKALQLEPTL LQAYILKGHA LSALGKKEDA LLVWEQGYGH
0101: AVRQSADLKQ FLELEELLKQ NRRITCENHA MESPESSISV SESALHVNEK PNSTHKNDSK LNDESELCSE SSDTSEIHCK PNSTHKNDSK LNDESELCSE
0201: SSDTSEIHCK AFDTSDGHDE LRDTVNGNEK LNSESNGTYD IFVKSSDESE LCSELNDTSE QSSKSSVVIH SKSSDISEVR RKSSNKYDIR SELGDEANRN
0301: KKFCVTRISK TKSISVDFRL SRGIAQVNEG NYSNAISIFD QILKEDPTYP EALVGRGTAY AFQRELSSAI ADFTKAIESN PSACEAWKRR GQARAALGES
0401: SEAIEDLTKA LEFEPNSTDI LHERGIVNFK FKDFNAAVED LSACVQLDKE NKSAYTYLGL ALSSIGEYKR AEEAHMKSIQ LDQNFLEGWA HLTQFYQDLA
0501: NPTKALECIE RVLQIDEGFA KAYHLRGLLR HGMGEHKKAI TDLSIGLGIE NSNIECLYLR ASCYHAIGEY GEAIKDYDKA LTLELDSMEK FVLQCLAFYQ
0601: KELALYAASK MNVEFCWFDI DRDINPLFKE YWCKRLHPKH VSENVFRQPS LKKNKHRKQD FAVTKQKAAL LHAADSIGKK IQYNCPGFLP NRRQHRMAGL
0701: AAIEIAQKVS KAWRSLQVER NRNTSKHGKK ARRKEKINTP SLNRGGAGCS TSSSSETSTS YSITEDRSSG RPMMSWHDVY SLAVKWRQIS EPCDPVVWVN
0801: KLSEEFNSGF GSHTPLILGQ AKVVRYFPNY QRTLDVAKTV MKEKRYVHNK ADDIMYLSED GKLQEIMHAE SCSDLYKIVG EDFWLATWCN STAIEGKRLE
0901: GTRITLLKMG EHGFDFAIRT PCTPSRWDDF DTEMAVAWDA LCNAYCGEKT YGSTNFDMLE NVRDAILRMT YYWYNFMPLS RGTAAVGFVV LLGLFLAANM
1001: EFTGSIPKDF QVDWEAILNL EPDSFLDSVK SWLYPSLKVT TSWKEYPDVA STFSTTGSVV AALSSYDD
0101: AVRQSADLKQ FLELEELLKQ NRRITCENHA MESPESSISV SESALHVNEK PNSTHKNDSK LNDESELCSE SSDTSEIHCK PNSTHKNDSK LNDESELCSE
0201: SSDTSEIHCK AFDTSDGHDE LRDTVNGNEK LNSESNGTYD IFVKSSDESE LCSELNDTSE QSSKSSVVIH SKSSDISEVR RKSSNKYDIR SELGDEANRN
0301: KKFCVTRISK TKSISVDFRL SRGIAQVNEG NYSNAISIFD QILKEDPTYP EALVGRGTAY AFQRELSSAI ADFTKAIESN PSACEAWKRR GQARAALGES
0401: SEAIEDLTKA LEFEPNSTDI LHERGIVNFK FKDFNAAVED LSACVQLDKE NKSAYTYLGL ALSSIGEYKR AEEAHMKSIQ LDQNFLEGWA HLTQFYQDLA
0501: NPTKALECIE RVLQIDEGFA KAYHLRGLLR HGMGEHKKAI TDLSIGLGIE NSNIECLYLR ASCYHAIGEY GEAIKDYDKA LTLELDSMEK FVLQCLAFYQ
0601: KELALYAASK MNVEFCWFDI DRDINPLFKE YWCKRLHPKH VSENVFRQPS LKKNKHRKQD FAVTKQKAAL LHAADSIGKK IQYNCPGFLP NRRQHRMAGL
0701: AAIEIAQKVS KAWRSLQVER NRNTSKHGKK ARRKEKINTP SLNRGGAGCS TSSSSETSTS YSITEDRSSG RPMMSWHDVY SLAVKWRQIS EPCDPVVWVN
0801: KLSEEFNSGF GSHTPLILGQ AKVVRYFPNY QRTLDVAKTV MKEKRYVHNK ADDIMYLSED GKLQEIMHAE SCSDLYKIVG EDFWLATWCN STAIEGKRLE
0901: GTRITLLKMG EHGFDFAIRT PCTPSRWDDF DTEMAVAWDA LCNAYCGEKT YGSTNFDMLE NVRDAILRMT YYWYNFMPLS RGTAAVGFVV LLGLFLAANM
1001: EFTGSIPKDF QVDWEAILNL EPDSFLDSVK SWLYPSLKVT TSWKEYPDVA STFSTTGSVV AALSSYDD
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.