Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G279000.1 | Wheat | cytosol | 86.55 | 86.81 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 86.35 | 86.61 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 86.45 | 86.28 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 85.95 | 86.21 |
| HORVU2Hr1G063340.8 | Barley | plastid | 86.55 | 83.81 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 84.27 | 80.83 |
| GSMUA_Achr5P01510_001 | Banana | cytosol | 7.42 | 80.65 |
| CDY06838 | Canola | cytosol | 4.65 | 56.63 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 59.74 | 56.55 |
| Solyc02g092780.1.1 | Tomato | nucleus | 58.75 | 56.3 |
| KRH77069 | Soybean | cytosol | 57.47 | 55.49 |
| KRH04486 | Soybean | cytosol | 56.78 | 55.09 |
| KRH58036 | Soybean | cytosol | 57.07 | 54.95 |
| CDX75658 | Canola | cytosol | 54.7 | 54.22 |
| CDX69309 | Canola | cytosol | 54.1 | 53.47 |
| Bra011768.1-P | Field mustard | cytosol | 54.5 | 53.29 |
| CDX72630 | Canola | mitochondrion | 5.64 | 53.27 |
| AT4G37460.1 | Thale cress | cytosol | 53.81 | 51.71 |
| CDY29552 | Canola | plasma membrane | 11.37 | 51.11 |
| Bra017825.1-P | Field mustard | plasma membrane | 11.37 | 51.11 |
| KRH28408 | Soybean | cytosol | 31.95 | 47.15 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 23.84 | 40.5 |
| CDY06839 | Canola | cytosol | 2.97 | 31.25 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:4342244 | ProteinID:BAC80093.1 | ProteinID:BAC83208.1 | ProteinID:BAF20663.1 |
| ProteinID:BAS99789.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | EnsemblPlantsGene:Os07g0113700 | EnsemblPlants:Os07t0113700-01 | PFAM:PF13181 | PFAM:PF13432 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR44749 | UniProt:Q7XHN9 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00001B3B3B | RefSeq:XP_015647426.1 | SEG:seg | : |
Description
Tetratricopeptide-like helical domain containing protein. (Os07t0113700-01)
Coordinates
chr7:-:753673..763372
Molecular Weight (calculated)
113394.0 Da
IEP (calculated)
6.752
GRAVY (calculated)
-0.368
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSERAELAR VCGGRNWSKA IRILDAHLAR SPSSIHDLCN RAFCYSQLEL HKHVVKDCDR ALELDPALLQ AYVLKGKALS ALGKREEALA VWEQGHEVAV
0101: RDTMDLKQLL ELEELVSSVK ICETIECEDR VVDASPCDTK VVISEDRVVD TSCTATTMAD TKTVVCEENI GNSGVISNGA VILANDNKAD NNKECSSPTK
0201: DTTGTHHTPK KTTKPDKKSK AKGRKEINSQ IEDVADSISS GETVAVDQTL FASKISKSSK SISLDFRLSR GIAQVNEGRY DQAISIFDQI LRETPTYPEA
0301: LIGRGTAYAF QRELDSAISD FTKAIQSNPS AGEAWKRRGQ ARAALGEFTE AVEDLTKALE FEPNSPDILH ERGIVNFKFK DYNAAVEDLS TCVKRDKKNS
0401: SAHTYLGLTL SALGEYKRAE DEHLLGIKYD ENFLDSWAHL SQLYLDIGCP EKMLNNVEKV LQIDVSFGKA YHLRGILYHG MGRHRSAIKD LSVALKHESS
0501: NIECLYLRAS CHHAIGEYKA AIKDYDDVLD LELDSMDKFV LQCLAFYQKE IALYTASKAN LEFSQFNIDD DVDPLFKEYW CKRLHPKNVA EKVYRQPPLR
0601: ISLRSGRLNK QDFKFTKHQT TLILAADSIG KKIQYNCRGF LPNQRQYRMA GLAAIEIAQK VSKAWRFLRN PKNNAKLVRR RDKLNACQNR GGYCSTSTLS
0701: GSPTSSPNED RISSGISLSW HDVYNIAVKW RQISEPCDPV VWINKLSEEF NSGFGSHTPM LLGQAKIIRY YPYYQSVLEA AKNIMLDLKY VNNAEDRAIF
0801: LTDIEKLKKI EVASSCSELY HIVGETYWVS TRCDSIAFQG RRLEGTRITT QNMGKTGFDF AIRTPCTPSR WEEYDEEMSA AWEAICEAYC SDTNPTRDPD
0901: MLDAVKAAIL RMTYYWYNFM PLSRGSAVVG YVVLLGLFLA ANMDVTASIP HGVQVDWEAI LSQDPDTFVD KIKPWLYPSI KTSRNLKDYA DVSVAFSTTG
1001: SVVAALTCVD T
0101: RDTMDLKQLL ELEELVSSVK ICETIECEDR VVDASPCDTK VVISEDRVVD TSCTATTMAD TKTVVCEENI GNSGVISNGA VILANDNKAD NNKECSSPTK
0201: DTTGTHHTPK KTTKPDKKSK AKGRKEINSQ IEDVADSISS GETVAVDQTL FASKISKSSK SISLDFRLSR GIAQVNEGRY DQAISIFDQI LRETPTYPEA
0301: LIGRGTAYAF QRELDSAISD FTKAIQSNPS AGEAWKRRGQ ARAALGEFTE AVEDLTKALE FEPNSPDILH ERGIVNFKFK DYNAAVEDLS TCVKRDKKNS
0401: SAHTYLGLTL SALGEYKRAE DEHLLGIKYD ENFLDSWAHL SQLYLDIGCP EKMLNNVEKV LQIDVSFGKA YHLRGILYHG MGRHRSAIKD LSVALKHESS
0501: NIECLYLRAS CHHAIGEYKA AIKDYDDVLD LELDSMDKFV LQCLAFYQKE IALYTASKAN LEFSQFNIDD DVDPLFKEYW CKRLHPKNVA EKVYRQPPLR
0601: ISLRSGRLNK QDFKFTKHQT TLILAADSIG KKIQYNCRGF LPNQRQYRMA GLAAIEIAQK VSKAWRFLRN PKNNAKLVRR RDKLNACQNR GGYCSTSTLS
0701: GSPTSSPNED RISSGISLSW HDVYNIAVKW RQISEPCDPV VWINKLSEEF NSGFGSHTPM LLGQAKIIRY YPYYQSVLEA AKNIMLDLKY VNNAEDRAIF
0801: LTDIEKLKKI EVASSCSELY HIVGETYWVS TRCDSIAFQG RRLEGTRITT QNMGKTGFDF AIRTPCTPSR WEEYDEEMSA AWEAICEAYC SDTNPTRDPD
0901: MLDAVKAAIL RMTYYWYNFM PLSRGSAVVG YVVLLGLFLA ANMDVTASIP HGVQVDWEAI LSQDPDTFVD KIKPWLYPSI KTSRNLKDYA DVSVAFSTTG
1001: SVVAALTCVD T
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.