Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34268 | Sorghum | cytosol, mitochondrion | 90.89 | 94.57 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 81.02 | 84.72 |
| TraesCS2B01G279000.1 | Wheat | cytosol | 80.93 | 84.62 |
| Os07t0113700-01 | Rice | cytosol | 80.83 | 84.27 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 80.27 | 83.93 |
| HORVU2Hr1G063340.8 | Barley | plastid | 80.65 | 81.42 |
| GSMUA_Achr5P01510_001 | Banana | cytosol | 7.12 | 80.65 |
| CDX72630 | Canola | mitochondrion | 5.69 | 56.07 |
| Solyc02g092780.1.1 | Tomato | nucleus | 55.5 | 55.45 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 55.5 | 54.78 |
| KRH04486 | Soybean | cytosol | 53.89 | 54.51 |
| KRH77069 | Soybean | cytosol | 54.08 | 54.44 |
| KRH58036 | Soybean | cytosol | 53.98 | 54.19 |
| CDY06838 | Canola | cytosol | 4.17 | 53.01 |
| CDY29552 | Canola | plasma membrane | 11.29 | 52.89 |
| Bra017825.1-P | Field mustard | plasma membrane | 11.29 | 52.89 |
| CDX69309 | Canola | cytosol | 50.76 | 52.3 |
| CDX75658 | Canola | cytosol | 50.57 | 52.25 |
| Bra011768.1-P | Field mustard | cytosol | 50.76 | 51.74 |
| AT4G37460.1 | Thale cress | cytosol | 50.85 | 50.95 |
| KRH28408 | Soybean | cytosol | 29.41 | 45.26 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 23.24 | 41.18 |
| CDY06839 | Canola | cytosol | 2.85 | 31.25 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:103648284 | MapMan:35.1 | UniProt:A0A1D6FA34 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | ProteinID:ONM27969.1 | PFAM:PF00515 |
| PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | UniParc:UPI0008456410 | EnsemblPlantsGene:Zm00001d007938 | EnsemblPlants:Zm00001d007938_P003 |
| EnsemblPlants:Zm00001d007938_T003 | SEG:seg | : | : | : | : |
Description
Suppressor of RPS4-RLD 1
Coordinates
chr2:+:243463450..243479726
Molecular Weight (calculated)
118259.0 Da
IEP (calculated)
7.852
GRAVY (calculated)
-0.293
Length
1054 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSDRAELAR LCSARNWSKA IRLLDSILAR SPSSIHDLCN RAFCYSQLEL HKHVVKDCDR ALLLDPALLQ AYILKGKALS SLDKKEDALA AWKQGYEIAV
0101: RDTTDLKQLL DLEELVSSVK ICGTTQSADH VMDASTCDTK VVISEDRVAD TSFAATTMAD TKTVVCEEAI GSSKVSSNGD TKLTNYNKKA DHNKVSSSSV
0201: KDITGTQAPK KAPKLDKKNK AKAVKEINGR AEGVTGRAST DESETISLDQ ALFATKISKS SKSISLDFRL SRGIAQVNEG RYDQAISIFD QILRETPTYP
0301: EALIGRGTAY AFQRELDSAI SDFTKAIQSS PSAGEAWKRR GQARAALGEF KEAIEDLTKA LEFEPNSPDI LHERGIVNFK FKDYNSALED LSTCVKHDKK
0401: NSSAHTYLGL TLSALGEYKR AEDEHVIGLK YDESFLDCWA HLAQVHSIVF NTAFTCFLFL SYMPVLCTHI SFHHKAHESQ KRTPQIYIVL WEMLFKLYLD
0501: LAYPEKLLNC LEKAIQIDSR FAKAYHLRGI LYHGMGRHRS AIKELSVALT YESSSIECLY LRASSHHAIG EYKAAIKGYD DVLDLELDSM DKFVLQCLSF
0601: YQKEMALYIA SKANLEFSQF NIDDDVDPLF KVKEYWCKRL HPKNVAEKVY RQPPLRISLR SGRLNKQDFK FTKHQTTLLL AADSIGKKIQ YNCHGFLPNQ
0701: RQYRMAGLAA IEIAQKVSKA WRFLRNPKNI AKLVRKRDKL NMSQNRGGYC STSTLAGSPT SSPNEDRVSS GISLSWQDVY NIAVKWRQIS EPCDPVVWVN
0801: KLSEEFNSGF GSHTPMLLGQ AKVIRYYPYY QRVLETAKTI MLDLKYVNNA EDRAIFLTDI DKLKKIEIAS SCSDLYHVVG ETYWVATRCD SMAFRGGKTG
0901: FDFAIRTPCT PSRWEEYDEE MTAAWEAICE AYCNDTNPTR DPGVLDAVKD AILRMTYYWY NFMPLSRGSA VVGYVVLLGL FLAANMDITA SIPPGVQVDW
1001: EAILSPDPGT FVDAVKPWLY PSTKISRCLK DYTDVSCAFS TTGSVVAALT SVDP
0101: RDTTDLKQLL DLEELVSSVK ICGTTQSADH VMDASTCDTK VVISEDRVAD TSFAATTMAD TKTVVCEEAI GSSKVSSNGD TKLTNYNKKA DHNKVSSSSV
0201: KDITGTQAPK KAPKLDKKNK AKAVKEINGR AEGVTGRAST DESETISLDQ ALFATKISKS SKSISLDFRL SRGIAQVNEG RYDQAISIFD QILRETPTYP
0301: EALIGRGTAY AFQRELDSAI SDFTKAIQSS PSAGEAWKRR GQARAALGEF KEAIEDLTKA LEFEPNSPDI LHERGIVNFK FKDYNSALED LSTCVKHDKK
0401: NSSAHTYLGL TLSALGEYKR AEDEHVIGLK YDESFLDCWA HLAQVHSIVF NTAFTCFLFL SYMPVLCTHI SFHHKAHESQ KRTPQIYIVL WEMLFKLYLD
0501: LAYPEKLLNC LEKAIQIDSR FAKAYHLRGI LYHGMGRHRS AIKELSVALT YESSSIECLY LRASSHHAIG EYKAAIKGYD DVLDLELDSM DKFVLQCLSF
0601: YQKEMALYIA SKANLEFSQF NIDDDVDPLF KVKEYWCKRL HPKNVAEKVY RQPPLRISLR SGRLNKQDFK FTKHQTTLLL AADSIGKKIQ YNCHGFLPNQ
0701: RQYRMAGLAA IEIAQKVSKA WRFLRNPKNI AKLVRKRDKL NMSQNRGGYC STSTLAGSPT SSPNEDRVSS GISLSWQDVY NIAVKWRQIS EPCDPVVWVN
0801: KLSEEFNSGF GSHTPMLLGQ AKVIRYYPYY QRVLETAKTI MLDLKYVNNA EDRAIFLTDI DKLKKIEIAS SCSDLYHVVG ETYWVATRCD SMAFRGGKTG
0901: FDFAIRTPCT PSRWEEYDEE MTAAWEAICE AYCNDTNPTR DPGVLDAVKD AILRMTYYWY NFMPLSRGSA VVGYVVLLGL FLAANMDITA SIPPGVQVDW
1001: EAILSPDPGT FVDAVKPWLY PSTKISRCLK DYTDVSCAFS TTGSVVAALT SVDP
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.