Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011768.1-P | Field mustard | cytosol | 95.59 | 94.29 |
| CDX69309 | Canola | cytosol | 89.51 | 89.25 |
| AT4G37460.1 | Thale cress | cytosol | 82.65 | 80.13 |
| CDX72630 | Canola | mitochondrion | 8.33 | 79.44 |
| CDY29552 | Canola | plasma membrane | 16.57 | 75.11 |
| CDY06838 | Canola | cytosol | 5.88 | 72.29 |
| CDX72631 | Canola | cytosol, endoplasmic reticulum | 36.76 | 63.03 |
| Solyc02g092780.1.1 | Tomato | nucleus | 63.73 | 61.61 |
| VIT_07s0129g00540.t01 | Wine grape | cytosol | 64.51 | 61.61 |
| KRH77069 | Soybean | cytosol | 62.45 | 60.84 |
| KRH04486 | Soybean | cytosol | 62.06 | 60.75 |
| KRH58036 | Soybean | cytosol | 62.45 | 60.67 |
| TraesCS2B01G279000.1 | Wheat | cytosol | 54.31 | 54.96 |
| TraesCS2D01G260800.1 | Wheat | cytosol | 54.31 | 54.96 |
| Os07t0113700-01 | Rice | cytosol | 54.22 | 54.7 |
| TraesCS2A01G263200.1 | Wheat | cytosol, mitochondrion | 54.02 | 54.66 |
| KXG34268 | Sorghum | cytosol, mitochondrion | 53.63 | 54.0 |
| HORVU2Hr1G063340.8 | Barley | plastid | 54.02 | 52.78 |
| KRH28408 | Soybean | cytosol | 34.41 | 51.24 |
| Zm00001d007938_P003 | Maize | cytosol, mitochondrion | 52.25 | 50.57 |
| CDY06839 | Canola | cytosol | 4.12 | 43.75 |
| GSMUA_Achr5P01500_001 | Banana | cytosol | 9.41 | 32.99 |
| TraesCS2B01G273000.1 | Wheat | plastid | 3.92 | 29.63 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:A0A078CKS6 | EnsemblPlants:CDX75658 | ProteinID:CDX75658 | ProteinID:CDX75658.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00121582001 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | PFAM:PF13181 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44749 |
| SMART:SM00028 | SUPFAM:SSF48452 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0004EE3E19 | SEG:seg | : | : | : | : |
Description
BnaA01g00440D
Coordinates
chrLK031804:-:2166034..2173004
Molecular Weight (calculated)
114068.0 Da
IEP (calculated)
7.302
GRAVY (calculated)
-0.369
Length
1020 amino acids
Sequence
(BLAST)
(BLAST)
0001: METAAASERV ELAKHCSSRN WSKAIRVLDS LLAKQCSILD ICNRAFCYNQ LELHKHVIKD CDKALQLDSC AIQAYLLKGR ALLALGRKQE ALLVLEQGYN
0101: IALQQTSDVK QLLELDELLN AARPEIDDVT LNHLAAETPV SSCASQKIDN CQVPTSMAVS KSMDASKQSG GASELRNGLA YKEKENVKSG SQINGKPSSN
0201: GSDLSETSDR LGDLSVIGNK LSSKSGSVSK QSLTAEARSG GSNETKINNN KCTIARISET HSISVDFRLS RGIAQVNEGN YMKAISIFDK VLKEEPTYPE
0301: ALIGRGTAYA FQRDLENAID DFTKAIQSNP AAGEAWKRRG QARAALGEFA EAVEDLTRAL ELEPKSPDIL HERGIINFRS KDFTAAVKDL SICLKQEKDN
0401: KSAYTYLGLA FASLGEYTKA EEAHLKSIQL DSNYLEAWLH LAQFYQELAD HSKALECIDE VLQVDNRVWK AYHLRGLVFH GLGEHRKAIQ ELSIGLSIES
0501: SIECLYLRGS CHHAVGEYRE AVKDYDATVD VELDAVEKFV LQCLAFYQKE LALYTASKVS SEFFCFDIDG DIDPMFKEYW CKRLHPKDVC EKVYRQPPLR
0601: ESLKKGKLKK QDLAITKPKA NLLRFTDMIG KKIQYFCPGF LPNRRQHRMA GLAVLEIAQK VSKAWRIEWR NSNKGTAKNG KKNRRRERIN MLSQNRGGAG
0701: CSTSTSSETS TGYASLEDRS SGRSILSWQD VYSSAVRWRQ ISEPCDPVVW VNKLSEEFNS GFGSHTPMVL GQAKVIRYFP NYERTLNLAK TIIKEKLCVR
0801: SKADKVIDIS KDEKIEEIMR AETCEELHKI VGEDFWVATW CHSTAFEGKR LEGTRITCIK KPGSLGYDFA IRTPCTPARW SDFDEEMTSA WEALCNAYCG
0901: ENYGSTNLQA LETVRDAILR MTYYWYNFMP LARGTAVTGF VVLLGLLLAA NMEFTECIPK GLQIDWEAIL SVEPDSFVGS VKSWLYPSLK INSSWKDHPE
1001: VSSAFSTTGS VVAALSTYND
0101: IALQQTSDVK QLLELDELLN AARPEIDDVT LNHLAAETPV SSCASQKIDN CQVPTSMAVS KSMDASKQSG GASELRNGLA YKEKENVKSG SQINGKPSSN
0201: GSDLSETSDR LGDLSVIGNK LSSKSGSVSK QSLTAEARSG GSNETKINNN KCTIARISET HSISVDFRLS RGIAQVNEGN YMKAISIFDK VLKEEPTYPE
0301: ALIGRGTAYA FQRDLENAID DFTKAIQSNP AAGEAWKRRG QARAALGEFA EAVEDLTRAL ELEPKSPDIL HERGIINFRS KDFTAAVKDL SICLKQEKDN
0401: KSAYTYLGLA FASLGEYTKA EEAHLKSIQL DSNYLEAWLH LAQFYQELAD HSKALECIDE VLQVDNRVWK AYHLRGLVFH GLGEHRKAIQ ELSIGLSIES
0501: SIECLYLRGS CHHAVGEYRE AVKDYDATVD VELDAVEKFV LQCLAFYQKE LALYTASKVS SEFFCFDIDG DIDPMFKEYW CKRLHPKDVC EKVYRQPPLR
0601: ESLKKGKLKK QDLAITKPKA NLLRFTDMIG KKIQYFCPGF LPNRRQHRMA GLAVLEIAQK VSKAWRIEWR NSNKGTAKNG KKNRRRERIN MLSQNRGGAG
0701: CSTSTSSETS TGYASLEDRS SGRSILSWQD VYSSAVRWRQ ISEPCDPVVW VNKLSEEFNS GFGSHTPMVL GQAKVIRYFP NYERTLNLAK TIIKEKLCVR
0801: SKADKVIDIS KDEKIEEIMR AETCEELHKI VGEDFWVATW CHSTAFEGKR LEGTRITCIK KPGSLGYDFA IRTPCTPARW SDFDEEMTSA WEALCNAYCG
0901: ENYGSTNLQA LETVRDAILR MTYYWYNFMP LARGTAVTGF VVLLGLLLAA NMEFTECIPK GLQIDWEAIL SVEPDSFVGS VKSWLYPSLK INSSWKDHPE
1001: VSSAFSTTGS VVAALSTYND
0001: MATATATSER FELAKHCSSR NWSKAIRVLD SLLAKESSIL DICNRAFCYN QLELHKHVIK DCDKALLLEP FAIQAFILKG RALLALGRKQ EAVLVLEQGY
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
0101: KSALQQTADV KQLLELEELL KDARREIDGI LKSHATESPQ ETPAYHSEKS DEKSDKLDNH ESGASSNGNS HESSSELGEQ SKIVSFSKVA SKASKQSDGN
0201: SDLCNGSVYK EKENGKCGSQ INGYYESCKP CNGSDLHDNL AESSDRFGEL SINGNKISIK SSKMSHKAEA RCGISDESRK NKKYTIARIS GTHSISVDFR
0301: LSRGIAQVNE GNYTKAISIF DKVLKEEPTY PEALIGRGTA YAFQRELESA IADFTKAIQS NPAASEAWKR RGQARAALGE YVEAVEDLTK ALVFEPNSPD
0401: VLHERGIVNF KSKDFTAAVK DLSICLKQEK DNKSAYTYLG LAFASLGEYK KAEEAHLKSI QLDSNYLEAW LHLAQFYQEL ADHCKALECI EQVLQVDNRV
0501: WKAYHLRGLV FHGLGEHRKA IQELSIGLSI ENTIECLYLR GSCYHAVGEY RDAVKDYDAT VDVELDAVEK FVLQCLAFYQ KELALYTASK VSSEFLCFDI
0601: DGDIDPMFKE YWCKRLHPKN VCEKVYRQPP LRESLKKGKL KKQDLAITKQ KANILRFADL IGKRIQYDCP GFLPNKRQHR MAGLAVIEIA QKVSKAWRIE
0701: WRNSTKGTTK NGKKNRRRER TNILSQNRGG AGCSSSSFSE TSTGYASLED RSSGRSILSW QDVYSPAVRW RQISEPCDPV VWVNKLSEEF NSGFGSHTPM
0801: VLGQAKVVRY FPNYERTLTL AKSIIKDKLS VRSKKDKVID LSKDEKIEKI MRAETCDELH NIVGEDFWVA TWCDSTGSEG KRLEGTRITC IQKPGRLGYD
0901: FSIRTPCTPA RWSDFDEEMT SAWEALCTAY CGENYGSTEL DALETVRDAI LRMTYYWYNF MPLARGTAVT GFVVLLGLLL AANMEFTETI PKGLQIDWEA
1001: ILNVEPGSFV DSVKSWLYPS LKINTSWRDH TEISSAFSTT GAVVAALSTY ND
Arabidopsis Description
SRFR1SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.