Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 7
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY17193 | Canola | endoplasmic reticulum | 52.32 | 60.38 |
KRH04538 | Soybean | extracellular | 57.22 | 57.38 |
KRH57968 | Soybean | endoplasmic reticulum | 56.95 | 57.1 |
KRH07581 | Soybean | endoplasmic reticulum | 56.4 | 56.56 |
GSMUA_Achr8P03350_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 49.32 | 54.35 |
KRH05634 | Soybean | endoplasmic reticulum | 69.48 | 53.57 |
VIT_18s0001g09990.t01 | Wine grape | endoplasmic reticulum | 67.85 | 53.32 |
KRH55771 | Soybean | cytosol, nucleus | 40.33 | 52.86 |
KRH60879 | Soybean | endoplasmic reticulum | 49.86 | 52.44 |
KRH51561 | Soybean | endoplasmic reticulum | 49.32 | 51.71 |
KRH60878 | Soybean | endoplasmic reticulum | 49.05 | 51.58 |
KRH15406 | Soybean | nucleus | 69.48 | 51.41 |
KRH51560 | Soybean | endoplasmic reticulum | 48.77 | 51.14 |
CDY17093 | Canola | endoplasmic reticulum | 63.22 | 50.77 |
CDY17044 | Canola | endoplasmic reticulum | 63.49 | 50.76 |
CDY63586 | Canola | endoplasmic reticulum | 63.49 | 50.76 |
Bra040749.1-P | Field mustard | endoplasmic reticulum | 62.4 | 50.11 |
Bra014057.1-P | Field mustard | endoplasmic reticulum | 62.67 | 50.11 |
AT1G47128.1 | Thale cress | endoplasmic reticulum | 62.94 | 50.0 |
CDY06760 | Canola | endoplasmic reticulum | 62.13 | 49.89 |
CDY22370 | Canola | extracellular | 62.4 | 49.78 |
CDX71540 | Canola | extracellular | 62.4 | 49.78 |
Bra033657.1-P | Field mustard | extracellular | 62.4 | 49.78 |
CDY25228 | Canola | extracellular | 61.58 | 49.13 |
AT5G43060.1 | Thale cress | endoplasmic reticulum | 61.85 | 49.03 |
KRH55752 | Soybean | endoplasmic reticulum | 45.5 | 48.69 |
KRH25039 | Soybean | extracellular, golgi, vacuole | 41.42 | 48.56 |
PGSC0003DMT400020654 | Potato | cytosol | 58.31 | 48.31 |
KRH55762 | Soybean | endoplasmic reticulum | 44.96 | 48.1 |
KRG88605 | Soybean | endoplasmic reticulum, golgi | 44.69 | 47.81 |
KRH29892 | Soybean | extracellular, golgi, vacuole | 44.69 | 47.81 |
KRH25765 | Soybean | endoplasmic reticulum, golgi | 44.69 | 47.81 |
KRH25729 | Soybean | endoplasmic reticulum, golgi | 44.69 | 47.81 |
KRG88601 | Soybean | endoplasmic reticulum, golgi | 44.69 | 47.81 |
Solyc04g078540.2.1 | Tomato | endoplasmic reticulum | 60.76 | 47.25 |
KXG27269 | Sorghum | endoplasmic reticulum | 59.4 | 46.98 |
KRH63669 | Soybean | endoplasmic reticulum | 46.32 | 46.96 |
KRH54277 | Soybean | endoplasmic reticulum | 46.32 | 46.96 |
KRH25728 | Soybean | extracellular | 43.87 | 46.94 |
KRH55800 | Soybean | endoplasmic reticulum, golgi | 43.87 | 46.94 |
GSMUA_Achr4P06140_001 | Banana | endoplasmic reticulum | 59.67 | 46.7 |
KRH13244 | Soybean | extracellular | 42.23 | 46.69 |
KRH25766 | Soybean | extracellular | 43.6 | 46.65 |
KRH55801 | Soybean | golgi, vacuole | 43.05 | 46.06 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi | 43.05 | 46.06 |
Zm00001d002065_P006 | Maize | plasma membrane | 58.58 | 45.94 |
Solyc12g088670.1.1 | Tomato | endoplasmic reticulum | 58.31 | 45.92 |
GSMUA_Achr4P12910_001 | Banana | endoplasmic reticulum | 59.13 | 45.88 |
GSMUA_Achr3P01000_001 | Banana | endoplasmic reticulum | 58.58 | 45.84 |
KRH55761 | Soybean | extracellular | 42.78 | 45.77 |
KRH55750 | Soybean | extracellular | 42.78 | 45.77 |
TraesCS2A01G512100.1 | Wheat | extracellular | 57.22 | 45.55 |
TraesCS2D01G513600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 57.22 | 45.36 |
TraesCS2B01G540100.2 | Wheat | golgi | 57.22 | 45.36 |
GSMUA_Achr1P15920_001 | Banana | endoplasmic reticulum | 57.77 | 45.11 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum | 57.49 | 44.99 |
KRH03891 | Soybean | endoplasmic reticulum | 46.32 | 44.85 |
GSMUA_Achr1P09800_001 | Banana | endoplasmic reticulum | 56.4 | 43.76 |
HORVU2Hr1G113460.2 | Barley | plasma membrane | 58.31 | 43.76 |
Zm00001d026458_P002 | Maize | endoplasmic reticulum | 57.22 | 43.75 |
KRH55769 | Soybean | extracellular, vacuole | 41.69 | 43.47 |
KRH25038 | Soybean | extracellular | 39.51 | 42.27 |
KRH50168 | Soybean | nucleus | 38.96 | 42.06 |
CDY27951 | Canola | endoplasmic reticulum | 49.32 | 39.43 |
KRH61098 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 43.05 | 35.99 |
CDY02431 | Canola | nucleus | 43.05 | 35.19 |
Protein Annotations
Gene3D:3.90.70.10 | MapMan:50.3.4 | EMBL:ACUP02002161 | MEROPS:C01.029 | EnsemblPlantsGene:GLYMA_04G041500 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
GO:GO:0019538 | GO:GO:0051603 | UniProt:I1JTM0 | ProteinID:KRH61340.1 | EnsemblPlants:KRH61341 | ProteinID:KRH61341 |
ProteinID:KRH61341.1 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF523 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233A9A2 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:3326300..3330171
Molecular Weight (calculated)
40825.9 Da
IEP (calculated)
4.607
GRAVY (calculated)
-0.359
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTNRSLMAT ILIVFFTVLA VSSALDMSII SYDRSHADKS GWKSDEEVMS IYEEWLVKHG KVYNAVEEKE KRFQIFKDNL NFIEEHNAVN RTYKVGLNRF
101: SDLSNEEYRS KYLGTKIDPS RMMARPSRRY SPRVADNLPE SVDWRKEGAV VRVKNQSECE GCWAFSAIAA VEGINKIVTG NLTALSEQEL LDCDRTVNAG
201: CSGGLVDYAF EFIINNGGID TEEDYPFQGA DGICDQYKIN ARAVTIDGYE RVPAYDELAL KKAVANQPVS VAIEAYGKEF QLYESGIFTG TCGTSIDHGV
301: TAVGYGTENG IDYWIVKNSW GENWGEAGYV RMERNIAEDT AGKCGIAILT LYPIKIGQNP SNPDNSS
101: SDLSNEEYRS KYLGTKIDPS RMMARPSRRY SPRVADNLPE SVDWRKEGAV VRVKNQSECE GCWAFSAIAA VEGINKIVTG NLTALSEQEL LDCDRTVNAG
201: CSGGLVDYAF EFIINNGGID TEEDYPFQGA DGICDQYKIN ARAVTIDGYE RVPAYDELAL KKAVANQPVS VAIEAYGKEF QLYESGIFTG TCGTSIDHGV
301: TAVGYGTENG IDYWIVKNSW GENWGEAGYV RMERNIAEDT AGKCGIAILT LYPIKIGQNP SNPDNSS
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.