Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009624 | Potato | extracellular | 62.41 | 62.41 |
| Bra019982.1-P | Field mustard | extracellular, golgi | 62.41 | 61.85 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 61.96 | 61.82 |
| VIT_18s0001g13270.t01 | Wine grape | extracellular | 61.28 | 61.7 |
| CDX93470 | Canola | plasma membrane | 61.96 | 61.4 |
| CDX94938 | Canola | extracellular, vacuole | 61.73 | 61.31 |
| AT1G09850.1 | Thale cress | endoplasmic reticulum | 60.59 | 60.87 |
| TraesCS1D01G327000.1 | Wheat | extracellular | 58.09 | 56.17 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 57.86 | 56.07 |
| Zm00001d038650_P001 | Maize | extracellular | 58.31 | 55.65 |
| EES18460 | Sorghum | endoplasmic reticulum | 58.09 | 55.19 |
| TraesCS1B01G338500.1 | Wheat | endoplasmic reticulum, unclear | 57.63 | 54.76 |
| Os05t0508300-01 | Rice | plasma membrane | 55.81 | 54.44 |
| KRH55771 | Soybean | cytosol, nucleus | 30.98 | 48.57 |
| HORVU1Hr1G075530.3 | Barley | plastid | 54.9 | 47.53 |
| KRH60879 | Soybean | endoplasmic reticulum | 37.59 | 47.28 |
| KRH51560 | Soybean | endoplasmic reticulum | 37.59 | 47.14 |
| KRH51561 | Soybean | endoplasmic reticulum | 37.13 | 46.57 |
| KRH60878 | Soybean | endoplasmic reticulum | 36.9 | 46.42 |
| KRH55752 | Soybean | endoplasmic reticulum | 34.85 | 44.61 |
| KRH25039 | Soybean | extracellular, golgi, vacuole | 31.66 | 44.41 |
| KRH57968 | Soybean | endoplasmic reticulum | 36.9 | 44.26 |
| KRH29892 | Soybean | extracellular, golgi, vacuole | 34.4 | 44.02 |
| KRH55762 | Soybean | endoplasmic reticulum | 34.4 | 44.02 |
| KRH04538 | Soybean | extracellular | 36.45 | 43.72 |
| KRH54277 | Soybean | endoplasmic reticulum | 35.99 | 43.65 |
| KRH55800 | Soybean | endoplasmic reticulum, golgi | 33.94 | 43.44 |
| KRH61341 | Soybean | endoplasmic reticulum, extracellular, vacuole | 35.99 | 43.05 |
| KRH07581 | Soybean | endoplasmic reticulum | 35.76 | 42.9 |
| KRH25728 | Soybean | extracellular | 33.49 | 42.86 |
| KRH25766 | Soybean | extracellular | 33.26 | 42.57 |
| KRH05634 | Soybean | endoplasmic reticulum | 46.01 | 42.44 |
| KRH55761 | Soybean | extracellular | 33.03 | 42.27 |
| KRH25765 | Soybean | endoplasmic reticulum, golgi | 33.03 | 42.27 |
| KRH25729 | Soybean | endoplasmic reticulum, golgi | 33.03 | 42.27 |
| KRG88605 | Soybean | endoplasmic reticulum, golgi | 33.03 | 42.27 |
| KRG88601 | Soybean | endoplasmic reticulum, golgi | 33.03 | 42.27 |
| KRH63669 | Soybean | endoplasmic reticulum | 34.85 | 42.27 |
| KRH13244 | Soybean | extracellular | 31.89 | 42.17 |
| KRH55750 | Soybean | extracellular | 32.8 | 41.98 |
| KRH15406 | Soybean | nucleus | 47.15 | 41.73 |
| KRH55801 | Soybean | golgi, vacuole | 32.57 | 41.69 |
| KRH25038 | Soybean | extracellular | 32.35 | 41.4 |
| KRH50168 | Soybean | nucleus | 31.21 | 40.29 |
| KRH03891 | Soybean | endoplasmic reticulum | 34.4 | 39.84 |
| KRH55769 | Soybean | extracellular, vacuole | 31.66 | 39.49 |
| Solyc04g080880.2.1 | Tomato | extracellular | 61.73 | 32.07 |
Protein Annotations
| EntrezGene:100805596 | Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | EMBL:ACUP02002155 | MEROPS:C01.A13 |
| EnsemblPlantsGene:GLYMA_04G028300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | InterPro:Granulin | InterPro:Granulin_sf |
| UniProt:I1JT73 | InterPro:IPR037277 | EnsemblPlants:KRH61098 | ProteinID:KRH61098 | ProteinID:KRH61098.1 | PFAM:PF00112 |
| PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF387 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00277 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002339C65 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:2309159..2312474
Molecular Weight (calculated)
49092.0 Da
IEP (calculated)
7.602
GRAVY (calculated)
-0.379
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRLYSLSLL QFLSLILLFT LFFLSASDTS ELFEKWCKEH SKTYSSEEEK LYRLKVFEDN YAFVAQHNQN ANNNNNNSSY TLSLNAFADL THHEFKTTRL
101: GLPLTLLRFK RPQNQQSRDL LHIPSQIDWR QSGAVTPVKD QASCGACWAF SATGAIEGIN KIVTGSLVSL SEQELIDCDT SYNSGCGGGL MDFAYQFVID
201: NKGIDTEDDY PYQARQRSCS KDKLKRRAVT IEDYVDVPPS EEEILKAVAS QPVSVGICGS EREFQLYSKG IFTGPCSTFL DHAVLIVGYG SENGVDYWIV
301: KNSWGKYWGM NGYIHMIRNS GNSKGICGIN TLASYPVKTK PNPPIPPPPG PVRCNLFTHC SEGETCCCAK SFLGICFSWK CCGLTSAVCC KDKRHCCPQD
401: YPICDTRRGQ CLKRTANGTT TITSENQDFS HKSRGWKSQ
101: GLPLTLLRFK RPQNQQSRDL LHIPSQIDWR QSGAVTPVKD QASCGACWAF SATGAIEGIN KIVTGSLVSL SEQELIDCDT SYNSGCGGGL MDFAYQFVID
201: NKGIDTEDDY PYQARQRSCS KDKLKRRAVT IEDYVDVPPS EEEILKAVAS QPVSVGICGS EREFQLYSKG IFTGPCSTFL DHAVLIVGYG SENGVDYWIV
301: KNSWGKYWGM NGYIHMIRNS GNSKGICGIN TLASYPVKTK PNPPIPPPPG PVRCNLFTHC SEGETCCCAK SFLGICFSWK CCGLTSAVCC KDKRHCCPQD
401: YPICDTRRGQ CLKRTANGTT TITSENQDFS HKSRGWKSQ
001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
Arabidopsis Description
XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.