Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 7
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82242 Canola cytosol 49.76 93.91
CDY36036 Canola plasma membrane 95.1 93.64
Bra035774.1-P Field mustard plasma membrane 66.27 67.81
AT3G20520.1 Thale cress plasma membrane 57.78 66.26
PGSC0003DMT400033423 Potato extracellular 8.49 54.2
KRH46280 Soybean cytosol 16.27 51.71
KRH46279 Soybean extracellular 43.54 50.07
KRG98625 Soybean extracellular 42.46 49.17
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 29.19 48.8
PGSC0003DMT400033463 Potato extracellular, plasma membrane 43.54 48.34
Solyc12g014570.1.1 Tomato nucleus 43.42 48.34
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 43.66 48.22
KRH46281 Soybean extracellular, golgi, plasma membrane 43.06 47.31
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 42.34 46.7
KRH14296 Soybean endoplasmic reticulum 42.11 46.68
KRH73850 Soybean endoplasmic reticulum 41.99 46.61
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 39.47 46.03
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 41.63 45.97
Bra028979.1-P Field mustard plasma membrane 41.99 45.82
Solyc07g065120.2.1 Tomato extracellular 41.27 45.82
PGSC0003DMT400057418 Potato extracellular 41.15 45.68
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 40.55 45.63
KRH46282 Soybean extracellular, plasma membrane 41.51 45.6
Bra035244.1-P Field mustard plasma membrane 40.91 45.12
EES05342 Sorghum plasma membrane 39.95 44.36
Bra034037.1-P Field mustard extracellular, vacuole 37.92 44.27
GSMUA_Achr8P25690_001 Banana plasma membrane 40.19 44.21
Zm00001d050917_P002 Maize plasma membrane 39.71 44.09
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 39.59 44.07
TraesCS6A01G200600.1 Wheat golgi 39.35 43.98
KRG98622 Soybean extracellular, golgi, plasma membrane 39.23 43.79
TraesCS6B01G226700.2 Wheat golgi 38.88 43.51
TraesCS6D01G189300.1 Wheat unclear 38.88 43.51
TraesCS2D01G332500.1 Wheat golgi 38.52 43.28
Bra035208.1-P Field mustard extracellular, golgi, plastid 14.11 43.22
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 40.55 43.13
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 38.28 43.01
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 38.28 43.01
HORVU2Hr1G081920.3 Barley plasma membrane 38.28 43.01
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 39.23 42.88
Zm00001d017036_P002 Maize plasma membrane 39.59 42.88
EES10974 Sorghum golgi 38.4 42.86
TraesCS7A01G243900.3 Wheat golgi 37.92 41.22
GSMUA_AchrUn_... Banana extracellular 8.01 40.85
KXG36695 Sorghum plasma membrane 37.68 40.65
Bra034040.1-P Field mustard extracellular 6.58 40.44
Zm00001d022153_P006 Maize extracellular, mitochondrion 37.2 40.03
GSMUA_Achr3P03920_001 Banana cytosol 37.56 39.75
TraesCS7B01G147500.1 Wheat unclear 36.48 39.51
Zm00001d025670_P001 Maize mitochondrion 7.18 39.22
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 35.17 38.94
Bra020384.1-P Field mustard extracellular, plasma membrane 35.17 38.89
PGSC0003DMT400033459 Potato endoplasmic reticulum 11.96 38.61
Bra020395.1-P Field mustard plasma membrane 34.45 38.55
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 36.96 38.15
Zm00001d031412_P001 Maize extracellular 33.85 37.99
Bra006785.1-P Field mustard extracellular, plasma membrane 35.17 37.94
Zm00001d052875_P001 Maize mitochondrion 34.33 36.98
OQU80956 Sorghum cytosol 37.44 35.37
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 40.43 35.06
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.32 30.56
Bra015928.1-P Field mustard extracellular, golgi, vacuole 9.81 20.87
Bra003814.1-P Field mustard golgi 9.57 20.46
Bra003813.1-P Field mustard cytosol 9.69 19.66
Bra009316.1-P Field mustard extracellular, vacuole 8.25 18.55
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:1.20.58.1140MapMan:24.2.22Gene3D:3.20.20.190MapMan:5.8.3EnsemblPlantsGene:Bra001790EnsemblPlants:Bra001790.1
EnsemblPlants:Bra001790.1-PGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_dom
InterPro:IPR017946InterPro:IPR030395UniProt:M4CC60PFAM:PF03009PFAM:PF03647InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF8SUPFAM:SSF51695InterPro:TMEM14TMHMM:TMhelix
UniParc:UPI00025405C9SEG:seg::::
Description
AT3G20520 (E=3e-268) SVL3 | SVL3 (SHV3-LIKE 3); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase
Coordinates
chrA03:+:18479376..18483965
Molecular Weight (calculated)
93039.0 Da
IEP (calculated)
8.043
GRAVY (calculated)
0.007
Length
836 amino acids
Sequence
(BLAST)
001: MHDFCFTIPY GLLLIGGGFI GYLKKGSITS FAGGAGTGLL LILAGYLSLN AFKKKKTSTI AVVLQTVISA ALTLVMGQRY LLTQKIMPAG LVAVISALMT
101: CFYVYKIATG GNKIPSKAAE QRLRQDSCMN IKTGDKQGRV KLQFFNLHNV LTSSWQTLSG KPPVVIARGG FSGVFPDSSS KAYEFVSVTT SPNVAVWCDL
201: QLTKDGVGIC FPNPNLYNYS DDKDVYPNNK EWFSVDFTWK DLSDVNLVQN VKSRSGVFDG SYQILTVEIV AELGAPGLWL NIQNSAFYRQ HNLSMRNYVV
301: SLSKRVDFIS SPEISFLKSM KEDVTKLIFR FLNQDQIEPF TNQTYSSLSK NLSYIKTFSS GMLVPKSYIW PVGSDLYLKP HTSLVTEAHR QGLLVFASEF
401: ANDFVFSYNY SYDPTAEYLS FIDNGNFSVD GFLSDFPVTP YRAISCFSHL DTKEDEEPAV VTIISNDGAS GDFPGCTDLA YEKAVKDGVD ILDCNVQMSK
501: DKIPFCMSSI DLLNTTNVFD TSFRNLSSTV AEIQPKSGIY TFSLTMSQNI EANPRNKNVG KLLTLSEFLF LANRYNSLLG VLIKVENAVY MYLAKHQGIS
601: VVDAVLNKTE RLSTQEGQTT SVAIMFQSTD KSVLMDFKKK KLIYPDELVY RVDQDIRDVT DSAIKEIMSF AGTIVISKES VLPYNGGLVK KKTDVVARLK
701: ESGFRVYVET FRNEFVTQPF DLFSDSTVEI NFFVQGVKID GIITDFPATT ARYRKSQCYR EMGMFRTGEL LPFANPRLLS PAQAPYPLLV ESDVMEPPLP
801: DVKSKNSTPT KAMAKAIQVF SPVRTMVVLV LFFISV
Best Arabidopsis Sequence Match ( AT3G20520.1 )
(BLAST)
001: MACPRVIFLI LITFFILQTA FSSSWQTLSG KPPAVIARGG FSGMFPDSSI QAYQLVNITT SPDVMLWCDL QLTKDGVGIC FPNLKLDNGS NVIRIDPHYK
101: ERFSVDFTWK ELSDVKLAQG VVSRPYIFDD VSSILAIEEV AKLTASGLWL NIQDSAFYAK HNLSMRNSVV SLSRRLKVNF ISSPGISFLK SMKNSVKPTV
201: TKLIFRFLKQ EHIEPFTNQS YGSLAKNLSY IRTFSSGILV PKSYIWPVDS ALYLQPHTSL VTDAHKEGLQ VFASEFANDF VIAYNYSYDP TAEYLSFIDN
301: GNFSVDGFLS DFPVTPYRAI NCFSHVDPKR AKEQAKITII SKNGASGDFP GCTDLAYQRA ASDGADILDC NVQMSKDKIP FCMSSFDLIN STNVIETSFR
401: NLSSVVSEIN PRRSGIYTFS LTMSQIQTLK PTISNLEKDS GLFRNPRNNK AGKFLTLSEF LFLPNRYSSL LGLLIEVENA AYLVEHQGIS VVDAVLDELK
501: RATTQQNKTS ARTILIQSTD KSVLMKFKEK NKMNHDELVY RVDDNIRDVA DSAIKDIKNF AGSIVISKKS VFPYKGFIIL EKETNIASKL KSNGLRVYVE
601: RFSNECVTHA FDFYDDPTLE IDSFVRDVQI DGIITDFPAT TARYRKNKCY GEFGLTTTGE LITFANPMLL PPAEAPYPAL LDSDVTEPPL PEARSQPPAS
701: SPSKAEEKAI EVPFAFIAMA ILVCFFISV
Arabidopsis Description
GDPDL5Glycerophosphodiester phosphodiesterase GDPDL5 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.