Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 4
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P25690_001 | Banana | plasma membrane | 62.58 | 61.84 |
GSMUA_Achr9P12610_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 60.32 | 57.63 |
PGSC0003DMT400033423 | Potato | extracellular | 9.72 | 55.73 |
PGSC0003DMT400057418 | Potato | extracellular | 51.93 | 51.79 |
Solyc07g065120.2.1 | Tomato | extracellular | 51.93 | 51.79 |
VIT_19s0090g01490.t01 | Wine grape | extracellular, plasma membrane, vacuole | 51.66 | 51.26 |
KRH73850 | Soybean | endoplasmic reticulum | 50.73 | 50.6 |
KRH46280 | Soybean | cytosol | 17.71 | 50.57 |
GSMUA_Achr3P03920_001 | Banana | cytosol | 53.0 | 50.38 |
PGSC0003DMT400033463 | Potato | extracellular, plasma membrane | 50.33 | 50.2 |
KRH46281 | Soybean | extracellular, golgi, plasma membrane | 50.87 | 50.2 |
CDY45656 | Canola | extracellular, golgi, plasma membrane | 43.54 | 50.08 |
Solyc12g014570.1.1 | Tomato | nucleus | 50.07 | 50.07 |
KRH14296 | Soybean | endoplasmic reticulum | 50.2 | 50.0 |
Bra002904.1-P | Field mustard | extracellular, plasma membrane, vacuole | 48.87 | 48.42 |
AT5G55480.1 | Thale cress | plasma membrane | 49.27 | 48.3 |
CDY29432 | Canola | cytosol, peroxisome | 38.22 | 48.15 |
CDY17323 | Canola | plasma membrane | 49.13 | 48.05 |
KRH46282 | Soybean | extracellular, plasma membrane | 48.34 | 47.7 |
Bra026409.1-P | Field mustard | extracellular, plasma membrane, vacuole | 48.07 | 47.69 |
CDX94294 | Canola | extracellular, plasma membrane, vacuole | 48.07 | 47.69 |
KRG98622 | Soybean | extracellular, golgi, plasma membrane | 47.54 | 47.66 |
CDX89312 | Canola | extracellular, plasma membrane, vacuole | 47.94 | 47.56 |
AT4G26690.1 | Thale cress | extracellular, vacuole | 47.94 | 47.43 |
CDY61647 | Canola | extracellular, plasma membrane | 47.67 | 47.42 |
CDY13237 | Canola | extracellular, plasma membrane, vacuole | 47.67 | 47.17 |
Bra004101.1-P | Field mustard | extracellular, plasma membrane, vacuole | 46.6 | 47.11 |
Bra035244.1-P | Field mustard | plasma membrane | 47.54 | 47.1 |
Bra019073.1-P | Field mustard | extracellular, plasma membrane, plastid | 31.29 | 47.0 |
KRG98625 | Soybean | extracellular | 45.14 | 46.95 |
KRH46279 | Soybean | extracellular | 45.41 | 46.91 |
Bra028979.1-P | Field mustard | plasma membrane | 47.8 | 46.87 |
Bra019092.1-P | Field mustard | extracellular, plasma membrane, vacuole | 44.74 | 46.86 |
CDY46687 | Canola | extracellular, plasma membrane, vacuole | 44.74 | 46.86 |
Bra034037.1-P | Field mustard | extracellular, vacuole | 44.61 | 46.79 |
CDY36746 | Canola | plasma membrane | 47.67 | 46.74 |
CDY12605 | Canola | extracellular, vacuole | 44.47 | 46.65 |
CDX86807 | Canola | cytosol | 14.25 | 46.52 |
CDX92806 | Canola | extracellular, plasma membrane, vacuole | 44.34 | 46.51 |
PGSC0003DMT400033459 | Potato | endoplasmic reticulum | 15.98 | 46.33 |
CDY19634 | Canola | plasma membrane | 44.34 | 45.87 |
CDY12599 | Canola | cytosol | 24.9 | 45.83 |
CDY71959 | Canola | extracellular, plastid, vacuole | 19.97 | 45.73 |
AT1G66970.2 | Thale cress | plasma membrane | 47.14 | 45.1 |
CDY11996 | Canola | plasma membrane | 46.34 | 45.02 |
CDY58867 | Canola | plasma membrane | 43.28 | 45.01 |
CDY42328 | Canola | cytosol | 15.45 | 44.96 |
CDY72472 | Canola | mitochondrion | 22.1 | 44.15 |
GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 33.16 | 43.76 |
AT3G20520.1 | Thale cress | plasma membrane | 42.48 | 43.76 |
GSMUA_Achr4P09430_001 | Banana | extracellular | 39.68 | 43.31 |
Bra035208.1-P | Field mustard | extracellular, golgi, plastid | 15.58 | 42.86 |
CDX82242 | Canola | cytosol | 24.9 | 42.21 |
Bra035774.1-P | Field mustard | plasma membrane | 45.27 | 41.62 |
CDX86766 | Canola | plasma membrane | 34.89 | 41.39 |
Bra001790.1-P | Field mustard | plasma membrane | 44.07 | 39.59 |
CDY36036 | Canola | plasma membrane | 44.07 | 38.99 |
CDY60410 | Canola | extracellular | 6.66 | 36.76 |
Bra034040.1-P | Field mustard | extracellular | 6.39 | 35.29 |
Bra035209.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 45.01 | 35.06 |
GSMUA_AchrUn_... | Banana | extracellular | 7.06 | 32.32 |
AT1G66980.2 | Thale cress | plasma membrane | 46.34 | 30.34 |
CDX86765 | Canola | extracellular, mitochondrion, vacuole | 6.13 | 27.71 |
CDY14478 | Canola | plasma membrane | 46.21 | 26.41 |
CDY60415 | Canola | plasma membrane | 40.48 | 25.63 |
GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 11.85 | 22.88 |
Protein Annotations
Gene3D:3.20.20.190 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:GP_PDE_dom | EnsemblPlantsGene:GSMUA_Achr1G16520_001 | EnsemblPlants:GSMUA_Achr1P16520_001 |
EnsemblPlants:GSMUA_Achr1T16520_001 | InterPro:IPR017946 | InterPro:IPR030395 | UniProt:M0S0G0 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl |
PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF1 | SUPFAM:SSF51695 | SignalP:SignalP-noTM | TMHMM:TMhelix |
UniParc:UPI000295886C | SEG:seg | : | : | : | : |
Description
Probable glycerophosphoryl diester phosphodiesterase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G16520_001]
Coordinates
chr1:+:12319921..12329978
Molecular Weight (calculated)
82254.6 Da
IEP (calculated)
4.860
GRAVY (calculated)
0.107
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTRRGGWEL SSSASFCAAL LLLHVAVVLP GVVSSQSLKN SNLTATSPWL TLSGGTPLVI AKGGFSGLFP DSSSFSYKFS YVAGSPDTIS WCDVRLTKDG
101: NGVCLPDIVL DNCTNIKLVY PEGKMNYIVS LAQAILSRSN KFDASLFPIL TVEDLVAQVK PAKLWLNIQH DIFYRQLNLD MRRYLLYLSK HDIPSYVSSP
201: EVGFLSSIVG RFRTSKTKLI FRFLGEDTIE PSTNVTYGSL LKNLTFVKTF ASGILIPKYY IWPVTSSGYL ESYTSVVMDA HREGLEVFAS EFANDALFSY
301: NYSYDPLAEV LSFIDNGIFS VDGVVTDFPI TASEAIGCYS HINMSNSDHG KPLIISHNGA SGVYPDCTDL SYQQAITDGA DYIDCPVQVT KDGILICMSS
401: INLMEVTTVT TSPFSSLLSV IPEIHDGPGI FTFNLTWEEI QKNLKPAISN PEIQYNIYRN PLYKNDGNFM SLGDFLAFGR DKDLSGILIS IENAAFLAEK
501: LGYSVTDGVM RALQDSGYSN QTGQEVMILS KNSSVLIKFR QQTKYELVYM VDESISDMVN SSIMDIKQFA HMIAISKQSV YPVSQQFITG QTKLVQKLQS
601: AGFAVYVYLF RNEFVSQPWD FLSDPTVEIN MYVQGAAVDG IITEYPGTAA AYRRNTCSKL GDQAPSYMSP VPIGGLLQIM DPQALPPTLA PMPSLHAADV
701: VEPPLPAVSP KPSSFGAGEE SGLPPSQPSY GRHLVASIFL SLVMLCGSLL V
101: NGVCLPDIVL DNCTNIKLVY PEGKMNYIVS LAQAILSRSN KFDASLFPIL TVEDLVAQVK PAKLWLNIQH DIFYRQLNLD MRRYLLYLSK HDIPSYVSSP
201: EVGFLSSIVG RFRTSKTKLI FRFLGEDTIE PSTNVTYGSL LKNLTFVKTF ASGILIPKYY IWPVTSSGYL ESYTSVVMDA HREGLEVFAS EFANDALFSY
301: NYSYDPLAEV LSFIDNGIFS VDGVVTDFPI TASEAIGCYS HINMSNSDHG KPLIISHNGA SGVYPDCTDL SYQQAITDGA DYIDCPVQVT KDGILICMSS
401: INLMEVTTVT TSPFSSLLSV IPEIHDGPGI FTFNLTWEEI QKNLKPAISN PEIQYNIYRN PLYKNDGNFM SLGDFLAFGR DKDLSGILIS IENAAFLAEK
501: LGYSVTDGVM RALQDSGYSN QTGQEVMILS KNSSVLIKFR QQTKYELVYM VDESISDMVN SSIMDIKQFA HMIAISKQSV YPVSQQFITG QTKLVQKLQS
601: AGFAVYVYLF RNEFVSQPWD FLSDPTVEIN MYVQGAAVDG IITEYPGTAA AYRRNTCSKL GDQAPSYMSP VPIGGLLQIM DPQALPPTLA PMPSLHAADV
701: VEPPLPAVSP KPSSFGAGEE SGLPPSQPSY GRHLVASIFL SLVMLCGSLL V
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.