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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035244.1-P Field mustard plasma membrane 92.29 45.78
CDY13237 Canola extracellular, plasma membrane, vacuole 88.03 43.61
CDY61647 Canola extracellular, plasma membrane 80.85 40.26
PGSC0003DMT400033423 Potato extracellular 13.83 39.69
CDY12605 Canola extracellular, vacuole 73.4 38.55
CDX94294 Canola extracellular, plasma membrane, vacuole 72.61 36.06
AT4G26690.1 Thale cress extracellular, vacuole 72.34 35.84
CDY45656 Canola extracellular, golgi, plasma membrane 62.23 35.83
CDX89312 Canola extracellular, plasma membrane, vacuole 72.07 35.8
CDY46687 Canola extracellular, plasma membrane, vacuole 65.69 34.45
CDX92806 Canola extracellular, plasma membrane, vacuole 65.43 34.36
CDY71959 Canola extracellular, plastid, vacuole 29.52 33.84
CDY12599 Canola cytosol 36.7 33.82
CDY17323 Canola plasma membrane 65.69 32.16
KRH46280 Soybean cytosol 22.34 31.94
CDY11831 Canola extracellular, vacuole 46.81 31.1
CDY36746 Canola plasma membrane 62.77 30.81
CDY11996 Canola plasma membrane 62.77 30.53
CDY29432 Canola cytosol, peroxisome 47.61 30.03
CDY58867 Canola plasma membrane 53.46 27.84
Solyc12g014570.1.1 Tomato nucleus 55.05 27.56
KRH14296 Soybean endoplasmic reticulum 54.26 27.06
KRG98625 Soybean extracellular 51.86 27.01
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.72 26.83
KRH73850 Soybean endoplasmic reticulum 53.46 26.69
KRH46279 Soybean extracellular 50.53 26.13
KRH46281 Soybean extracellular, golgi, plasma membrane 52.66 26.02
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 51.6 25.63
PGSC0003DMT400057418 Potato extracellular 51.06 25.5
KRG98622 Soybean extracellular, golgi, plasma membrane 50.27 25.23
CDY19634 Canola plasma membrane 48.67 25.21
Solyc07g065120.2.1 Tomato extracellular 50.27 25.1
CDX82242 Canola cytosol 29.52 25.06
KRH46282 Soybean extracellular, plasma membrane 50.53 24.97
EES05342 Sorghum plasma membrane 48.4 24.17
Zm00001d050917_P002 Maize plasma membrane 48.14 24.04
EES10974 Sorghum golgi 47.61 23.9
GSMUA_Achr8P25690_001 Banana plasma membrane 47.87 23.68
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 46.81 23.66
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 46.81 23.66
TraesCS2D01G332500.1 Wheat golgi 46.81 23.66
TraesCS6B01G226700.2 Wheat golgi 46.54 23.43
Zm00001d017036_P002 Maize plasma membrane 47.87 23.32
TraesCS6D01G189300.1 Wheat unclear 46.28 23.29
CDY32720 Canola extracellular, plastid, vacuole 46.54 23.27
HORVU2Hr1G081920.3 Barley plasma membrane 46.01 23.25
TraesCS6A01G200600.1 Wheat golgi 46.01 23.13
CDY32730 Canola plasma membrane 45.74 23.09
CDY14478 Canola plasma membrane 80.59 23.06
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.14 23.03
CDY02800 Canola extracellular, plasma membrane, plastid 45.74 22.99
CDY43885 Canola extracellular, golgi, plasma membrane 45.74 22.9
CDY02788 Canola plasma membrane 45.21 22.82
CDX88656 Canola plasma membrane 46.81 22.71
TraesCS7A01G243900.3 Wheat golgi 45.74 22.37
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 45.21 22.22
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 44.15 22.1
Zm00001d052875_P001 Maize mitochondrion 45.48 22.04
GSMUA_Achr3P03920_001 Banana cytosol 46.01 21.9
KXG36695 Sorghum plasma membrane 44.68 21.68
TraesCS7B01G147500.1 Wheat unclear 44.41 21.63
CDY36036 Canola plasma membrane 48.4 21.44
CDX86766 Canola plasma membrane 35.64 21.17
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.62 21.11
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 44.95 20.86
CDY60415 Canola plasma membrane 64.36 20.4
Zm00001d031412_P001 Maize extracellular 38.83 19.6
OQU80956 Sorghum cytosol 46.01 19.55
CDX85814 Canola extracellular 9.57 18.37
CDY42328 Canola cytosol 10.37 15.12
CDY12601 Canola extracellular 5.32 14.71
CDY60410 Canola extracellular 4.52 12.5
CDX69980 Canola extracellular, golgi, vacuole 11.7 11.83
CDX99041 Canola extracellular 11.7 11.8
CDY11071 Canola extracellular, golgi 12.23 11.76
CDX68196 Canola golgi 12.23 11.59
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 12.77 11.43
CDX73068 Canola extracellular 11.44 10.89
CDX68195 Canola peroxisome 11.17 10.19
Zm00001d025670_P001 Maize mitochondrion 3.72 9.15
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 0.8 8.33
GSMUA_AchrUn_... Banana extracellular 3.46 7.93
CDX71386 Canola extracellular 2.93 5.82
CDX85815 Canola mitochondrion 3.72 4.84
CDX86765 Canola extracellular, mitochondrion, vacuole 2.13 4.82
PGSC0003DMT400033459 Potato endoplasmic reticulum 1.06 1.54
CDX86807 Canola cytosol 0.8 1.3
CDY11832 Canola cytosol, peroxisome, plastid 0.27 0.65
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078K3J3UniProt:A0A078K3J3EnsemblPlants:CDY72472ProteinID:CDY72472
ProteinID:CDY72472.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00029940001InterPro:IPR017946
InterPro:IPR030395PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1
SUPFAM:SSF51695UniParc:UPI0004EE57E1::::
Description
BnaAnng41260DBnaAnng41260D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K3J3]
Coordinates
chrLK051249:+:2..2003
Molecular Weight (calculated)
41616.2 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.087
Length
376 amino acids
Sequence
(BLAST)
001: VISLSISFFK HQFRRKQEKT VLGLSFYRFS TQGWFTIDFS LRDLNDHDAF FEQQNLSMSK FLISASRIVS INYISSPEVN FFTKISGRFG RNGPLFVFQF
101: LRKEDIEPTT NQTYGSILSN LTFVKTFASG ILVPKSYILP LDDKQYLVPP PKSLVQDAHK AGLQVYVSGF ANDIDIAHDY SSDPVSEYLS FVDNGNFSVD
201: GVLSDFPLTA SSSIDCFSHL GQNAIKQVNF LVISKNGASG DYPGCTDLAY DKAIKDGADV IDCSVQMSSD GVPFCSRSID LSNSTMISQT PFAQRSTLVP
301: EISSSGGIYT FSLTWAEIRN LTPAIGNPYR SYTMFRNPNK KNSGKLILLS EFLNLAKNST SLSGVLISVE VSSPKE
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.