Factsheet for AT4G26690.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 4
golgi 4
extracellular 5
vacuole 4
plasma membrane 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	76.94	81.45
CDY46687	Canola	extracellular, plasma membrane, vacuole	76.81	81.31
CDX94294	Canola	extracellular, plasma membrane, vacuole	80.9	81.11
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	80.9	81.11
CDX89312	Canola	extracellular, plasma membrane, vacuole	80.76	80.98
CDX92806	Canola	extracellular, plasma membrane, vacuole	76.28	80.87
CDY61647	Canola	extracellular, plasma membrane	76.28	76.69
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	74.84	76.45
Bra035244.1-P	Field mustard	plasma membrane	75.63	75.73
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	49.67	75.4
CDY12605	Canola	extracellular, vacuole	71.01	75.28
CDX86807	Canola	cytosol	22.79	75.22
CDY13237	Canola	extracellular, plasma membrane, vacuole	74.84	74.84
Bra034037.1-P	Field mustard	extracellular, vacuole	70.22	74.44
AT1G66970.2	Thale cress	plasma membrane	75.36	72.87
CDY72472	Canola	mitochondrion	35.84	72.34
AT5G55480.1	Thale cress	plasma membrane	72.6	71.93
CDY42328	Canola	cytosol	23.72	69.77
CDY12599	Canola	cytosol	36.89	68.63
PGSC0003DMT400033423	Potato	extracellular	10.01	58.02
KRH73850	Soybean	endoplasmic reticulum	56.13	56.57
KRH14296	Soybean	endoplasmic reticulum	55.47	55.84
Solyc12g014570.1.1	Tomato	nucleus	55.07	55.66
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	55.47	55.61
PGSC0003DMT400057418	Potato	extracellular	54.55	54.98
Solyc07g065120.2.1	Tomato	extracellular	54.41	54.85
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	54.15	54.58
KRG98625	Soybean	extracellular	51.78	54.43
KRH46279	Soybean	extracellular	51.91	54.2
KRH46281	Soybean	extracellular, golgi, plasma membrane	54.02	53.88
KRH46280	Soybean	cytosol	18.58	53.61
KRH46282	Soybean	extracellular, plasma membrane	52.96	52.83
KRG98622	Soybean	extracellular, golgi, plasma membrane	49.8	50.47
EES05342	Sorghum	plasma membrane	49.93	50.33
GSMUA_Achr8P25690_001	Banana	plasma membrane	50.2	50.13
Zm00001d050917_P002	Maize	plasma membrane	49.54	49.93
TraesCS6A01G200600.1	Wheat	golgi	48.48	49.2
TraesCS6D01G189300.1	Wheat	unclear	48.22	49.0
TraesCS2D01G332500.1	Wheat	golgi	47.96	48.92
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	47.96	48.92
EES10974	Sorghum	golgi	48.22	48.87
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	47.83	48.79
HORVU2Hr1G081920.3	Barley	plasma membrane	47.83	48.79
TraesCS6B01G226700.2	Wheat	golgi	47.96	48.73
Zm00001d017036_P002	Maize	plasma membrane	49.41	48.58
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	48.88	48.5
Zm00001d025670_P001	Maize	mitochondrion	9.75	48.37
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	50.07	48.35
AT3G20520.1	Thale cress	plasma membrane	46.11	48.01
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	47.43	47.94
PGSC0003DMT400033459	Potato	endoplasmic reticulum	16.34	47.88
AT1G66980.2	Thale cress	plasma membrane	71.01	46.99
AT5G58050.1	Thale cress	extracellular, plasma membrane	45.59	45.95
GSMUA_AchrUn_...	Banana	extracellular	9.88	45.73
TraesCS7A01G243900.3	Wheat	golgi	46.25	45.64
TraesCS7B01G147500.1	Wheat	unclear	45.72	44.95
AT5G58170.1	Thale cress	extracellular, plasma membrane	44.01	44.53
KXG36695	Sorghum	plasma membrane	44.93	44.0
Zm00001d052875_P001	Maize	mitochondrion	44.14	43.17
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	45.59	42.72
Zm00001d022153_P006	Maize	extracellular, mitochondrion	43.61	42.6
GSMUA_Achr3P03920_001	Banana	cytosol	44.14	42.41
CDY14478	Canola	plasma membrane	73.39	42.39
Zm00001d031412_P001	Maize	extracellular	40.45	41.21
CDY60415	Canola	plasma membrane	64.16	41.06
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	1.84	38.89
OQU80956	Sorghum	cytosol	44.93	38.53
AT1G74210.1	Thale cress	extracellular	11.2	21.68
AT5G08030.2	Thale cress	golgi	10.28	20.16

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EntrezGene:828776	ProteinID:AEE85238.1	ArrayExpress:AT4G26690	EnsemblPlantsGene:AT4G26690
RefSeq:AT4G26690	TAIR:AT4G26690	RefSeq:AT4G26690-TAIR-G	EnsemblPlants:AT4G26690.1	TAIR:AT4G26690.1	EMBL:AY056280
Unigene:At.23755	ProteinID:CAB36515.1	ProteinID:CAB79524.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006071	GO:GO:0006629
GO:GO:0007275	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0008889	GO:GO:0009505
GO:GO:0009653	GO:GO:0009791	GO:GO:0009932	GO:GO:0009987	GO:GO:0010026	GO:GO:0010053
GO:GO:0010442	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787
GO:GO:0030154	GO:GO:0030312	GO:GO:0031225	GO:GO:0040007	GO:GO:0046658	GO:GO:0048765
GO:GO:0052541	GO:GO:0071555	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395	RefSeq:NP_567755.1
PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PO:PO:0000005	PO:PO:0000013	PO:PO:0000014	PO:PO:0000037
PO:PO:0000230	PO:PO:0000256	PO:PO:0000282	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF1	UniProt:Q9SZ11
Symbol:SHV3	SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI0000162B25	SEG:seg	:

Description

GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]

Coordinates

chr4:-:13456434..13460105

Molecular Weight (calculated)

82566.4 Da

IEP (calculated)

5.164

GRAVY (calculated)

0.051

Length

759 amino acids

Sequence
(BLAST)

001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.