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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89312 Canola extracellular, plasma membrane, vacuole 99.74 99.74
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 81.24 85.77
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 54.03 81.8
AT4G26690.1 Thale cress extracellular, vacuole 81.11 80.9
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 75.3 76.72
Bra034037.1-P Field mustard extracellular, vacuole 71.47 75.56
Bra035244.1-P Field mustard plasma membrane 74.64 74.54
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 71.99 71.9
Bra028979.1-P Field mustard plasma membrane 68.82 68.02
Bra034040.1-P Field mustard extracellular 11.76 65.44
Bra035208.1-P Field mustard extracellular, golgi, plastid 21.4 59.34
PGSC0003DMT400033423 Potato extracellular 10.04 58.02
Solyc12g014570.1.1 Tomato nucleus 54.95 55.39
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 55.35 55.35
KRH73850 Soybean endoplasmic reticulum 54.82 55.11
Solyc07g065120.2.1 Tomato extracellular 54.69 54.98
PGSC0003DMT400057418 Potato extracellular 54.56 54.85
KRH46281 Soybean extracellular, golgi, plasma membrane 55.09 54.8
KRG98625 Soybean extracellular 51.92 54.43
KRH14296 Soybean endoplasmic reticulum 54.16 54.38
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.63 53.92
KRH46279 Soybean extracellular 51.65 53.78
KRH46282 Soybean extracellular, plasma membrane 53.5 53.22
KRG98622 Soybean extracellular, golgi, plasma membrane 50.59 51.13
KRH46280 Soybean cytosol 17.7 50.95
GSMUA_Achr8P25690_001 Banana plasma membrane 49.93 49.74
Zm00001d050917_P002 Maize plasma membrane 49.27 49.54
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.91 49.42
TraesCS6A01G200600.1 Wheat golgi 48.74 49.33
HORVU2Hr1G081920.3 Barley plasma membrane 48.48 49.33
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 48.35 49.19
EES05342 Sorghum plasma membrane 48.88 49.14
TraesCS6D01G189300.1 Wheat unclear 48.48 49.13
TraesCS2D01G332500.1 Wheat golgi 48.22 49.06
TraesCS6B01G226700.2 Wheat golgi 48.35 49.0
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 48.08 48.92
EES10974 Sorghum golgi 47.69 48.2
GSMUA_AchrUn_... Banana extracellular 10.44 48.17
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 48.61 48.1
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 49.93 48.09
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.69 48.07
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 60.63 47.61
Zm00001d017036_P002 Maize plasma membrane 48.35 47.41
Zm00001d025670_P001 Maize mitochondrion 9.25 45.75
Bra020384.1-P Field mustard extracellular, plasma membrane 45.57 45.63
TraesCS7A01G243900.3 Wheat golgi 45.97 45.25
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 44.65 44.77
TraesCS7B01G147500.1 Wheat unclear 45.31 44.43
KXG36695 Sorghum plasma membrane 45.18 44.13
Zm00001d052875_P001 Maize mitochondrion 44.91 43.81
Bra020395.1-P Field mustard plasma membrane 43.06 43.64
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.39 43.24
Bra006785.1-P Field mustard extracellular, plasma membrane 44.25 43.23
Bra035774.1-P Field mustard plasma membrane 46.5 43.08
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.44 42.47
Zm00001d031412_P001 Maize extracellular 41.48 42.15
GSMUA_Achr3P03920_001 Banana cytosol 43.86 42.03
Bra001790.1-P Field mustard plasma membrane 45.97 41.63
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.85 38.89
OQU80956 Sorghum cytosol 45.18 38.64
Bra003814.1-P Field mustard golgi 11.36 21.99
Bra015928.1-P Field mustard extracellular, golgi, vacuole 11.36 21.88
Bra009316.1-P Field mustard extracellular, vacuole 10.57 21.51
Bra003813.1-P Field mustard cytosol 11.1 20.39
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra026409EnsemblPlants:Bra026409.1EnsemblPlants:Bra026409.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4ECA0PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI000254556A
SEG:seg:::::
Description
AT4G26690 (E=0.0) SHV3, MRH5, GPDL2 | SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA01:-:9475934..9478851
Molecular Weight (calculated)
82460.0 Da
IEP (calculated)
4.951
GRAVY (calculated)
-0.009
Length
757 amino acids
Sequence
(BLAST)
001: MRGLRASSLL LCGVVLIQLL AVQIDAQRPK TQWKTLSGFS PRVIARGGFS GLFPDSSLDA YNFAMQTSVL DAVLWCDLQL TKDGAGICFP DLTMSNASNV
101: ESVYPKGQST YPVNGVPTPG WFTIDLSLRA LTNVSLIRGI LSRSDKFDGN GYTISTVQTV NKEMKPQGFW LNVQHDAFYA QHNLSMSNFL VSVTKTVIVD
201: FISSPEVNFF RKIAGRFGRE GPSFVFRFLE KEQFEPTTNR TYGSILSNLT FVKTFASGIL VPKSYVLPLD DKQYLLPSTS LVQDAHKAGL EVFVSGFAND
301: VDIAHDYSFD PVSEYLSFMD NGNFSVDGVL SDFPITASAS VECFSHVARN ATKQVDFLVI SKNGASGDYP GCTNLAYEKA INDGADVIDC SVQMSSDGKP
401: FCSSSIDLGN TTMVAQSPLR NRSTSVPEIS SVNGIYTFTL TWPEIQTLTP AISNPYSRRF NMFRNPNERN SGKLLSLSEF LNLAKNSTTL SGVLISVENA
501: AYLREKQGLD VVKAVLDALT ETGYSNRTTT KVMIQSTNSS VLVDFKKQSQ YETVYKVEET IRDILDSAIE DIKTFASAVV IGKSSVFPVV DGFVTGQTNV
601: VERLQKSQLP VYVELFQNEF VSQPFDFFSD ATVEINSYVT GPGINGTITE FPFTAARYRR NRCLASKETL SYMAPVQPGG LLEVVSPGSL PPAEAPNPVF
701: TDADVTEPPL PPVTAKAPTP TPGTPSTTAP APSGQTQLTL SLLLSVFAMV LASLLLM
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.