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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid, extracellular

Predictor Summary:
  • plastid 4
  • extracellular 3
  • plasma membrane 3
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034040.1-P Field mustard extracellular 22.34 44.85
Zm00001d025670_P001 Maize mitochondrion 18.68 33.33
GSMUA_AchrUn_... Banana extracellular 19.05 31.71
Bra028979.1-P Field mustard plasma membrane 75.09 26.76
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 89.38 25.31
AT5G55480.1 Thale cress plasma membrane 69.96 24.93
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 68.86 24.8
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 43.59 23.8
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 56.41 21.48
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 59.34 21.4
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 57.51 21.13
KRH46280 Soybean cytosol 20.15 20.91
Bra035244.1-P Field mustard plasma membrane 54.58 19.66
Bra034037.1-P Field mustard extracellular, vacuole 50.55 19.27
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 49.45 17.83
PGSC0003DMT400057418 Potato extracellular 49.08 17.8
Solyc07g065120.2.1 Tomato extracellular 48.72 17.66
KRH73850 Soybean endoplasmic reticulum 47.62 17.26
KRH14296 Soybean endoplasmic reticulum 47.25 17.11
KRH46281 Soybean extracellular, golgi, plasma membrane 46.89 16.82
TraesCS6D01G189300.1 Wheat unclear 45.42 16.6
TraesCS6A01G200600.1 Wheat golgi 45.42 16.58
Zm00001d050917_P002 Maize plasma membrane 45.42 16.47
TraesCS6B01G226700.2 Wheat golgi 45.05 16.47
Solyc12g014570.1.1 Tomato nucleus 45.05 16.38
PGSC0003DMT400033463 Potato extracellular, plasma membrane 45.05 16.33
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 45.42 16.21
KRH46282 Soybean extracellular, plasma membrane 45.05 16.16
KRG98625 Soybean extracellular 42.49 16.07
EES05342 Sorghum plasma membrane 43.59 15.8
KRH46279 Soybean extracellular 41.76 15.68
HORVU2Hr1G081920.3 Barley plasma membrane 42.49 15.59
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 42.86 15.58
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 44.69 15.52
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 42.12 15.46
GSMUA_Achr8P25690_001 Banana plasma membrane 42.86 15.39
TraesCS2D01G332500.1 Wheat golgi 41.76 15.32
EES10974 Sorghum golgi 41.76 15.22
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 41.39 15.19
Zm00001d017036_P002 Maize plasma membrane 42.49 15.03
KRG98622 Soybean extracellular, golgi, plasma membrane 41.03 14.95
Zm00001d031412_P001 Maize extracellular 40.29 14.77
TraesCS7B01G147500.1 Wheat unclear 41.39 14.64
KXG36695 Sorghum plasma membrane 41.39 14.58
TraesCS7A01G243900.3 Wheat golgi 41.03 14.56
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 42.12 14.2
Bra001790.1-P Field mustard plasma membrane 43.22 14.11
Zm00001d052875_P001 Maize mitochondrion 39.93 14.05
Zm00001d022153_P006 Maize extracellular, mitochondrion 39.93 14.03
GSMUA_Achr3P03920_001 Banana cytosol 39.93 13.8
Bra035774.1-P Field mustard plasma membrane 40.66 13.59
OQU80956 Sorghum cytosol 41.39 12.77
Bra020384.1-P Field mustard extracellular, plasma membrane 35.16 12.7
Bra006785.1-P Field mustard extracellular, plasma membrane 35.16 12.39
Bra020395.1-P Field mustard plasma membrane 32.97 12.05
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 32.6 11.79
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.47 11.11
PGSC0003DMT400033459 Potato endoplasmic reticulum 8.42 8.88
PGSC0003DMT400033423 Potato extracellular 2.56 5.34
Bra009316.1-P Field mustard extracellular, vacuole 5.13 3.76
Bra003814.1-P Field mustard golgi 5.13 3.58
Bra015928.1-P Field mustard extracellular, golgi, vacuole 4.03 2.8
Bra003813.1-P Field mustard cytosol 4.03 2.67
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra035208EnsemblPlants:Bra035208.1EnsemblPlants:Bra035208.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4F2B0InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704
PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002546931
SEG:seg:::::
Description
AT5G55480 (E=9e-033) SVL1 | SVL1 (SHV3-LIKE 1); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase
Coordinates
chrA08:-:9131976..9133223
Molecular Weight (calculated)
30324.6 Da
IEP (calculated)
8.051
GRAVY (calculated)
0.197
Length
273 amino acids
Sequence
(BLAST)
001: MITCMQDNPS MFRLRASKFL LLSVLILSQF LSTQLLAQRS KSPWQTLTGE APLVIARGGF SGLFPDSSVT AYSFVSATSV PDAVLWCDVQ LTKDGVGICF
101: PDVTMTGSPF DFTSKDLKRV SLIRGILSRS PAFNDNRNVI STVENIATQF KPAGFWLNVQ HDAFYAQHNL SMSGFLLSVS KTVTIDYLSS PELKFFRDIG
201: SRRLLQAFLV DFKKQSPYET VYQVEETLGD IFDSAIEDIK KLADAVVVSR LSVYLVSASF FLTGQAKLLQ LLH
Best Arabidopsis Sequence Match ( AT1G66980.1 )
(BLAST)
0001: MNSQQSTRTK QMLQQSSTHL LCGVVLLQLF AAQVDAQRST SPWQTLSGDA PLVIARGGFS GLFPDSSLAA YQFAMVVSVA DVVLWCDVQL TKDGHGICFP
0101: DLNLANASNS EEVYPNRQKS YPVNGVTTKG WFPIDFSLTE LQKVLFSLIR GILSRSGKFD ENGYSISTVQ NVATQMKPAL FWLNVQHDEF YEQHNLSMSS
0201: FLLSTSRTVS IDFISSPEVN FFRKIAGGFG NNGPSFVFQF MGKEDFEPTT NRTYGSILSN LSFVKTFASG ILVPKSYILP LDDKQYLLPH TSLVQDAHKA
0301: GLKLYASGFA NDVDIAYNYS WDPVSEYLSF VDNGNFSVDG MLSDFPLTAS ASVDCFSHIG RNATKQVDFL VISKNGASGE YPGCTKLAYE KAIKDGSDVI
0401: DCPVQMSSDG IPFCSSSIDL VNSTTVGQTH LRNRSIIVPE ISSVAGIFTF SLTWHEIQSL TPAISNPFRE NGMSRNPNER NSGNLISLYE FLNLAKNSTS
0501: LSGILISLEN VVYLREKKGL DVVKVVLNRL TETGYIVGTL KVMIQSTTRL VLVDFKNQST YKTVYKIKET IGNITDSAIE DIKKFANAVV INKASVFPNS
0601: DSFLTGQTTN VLERLQKFQL PVYVELFQNE FVSQPFDFFA DETVEINAYI FGAGINGTIT EFPYTAARYK RNRCLGREEV PPYMLPVNPG GVLTLISTSS
0701: LPPAQDPNPI FTHDDVTEPP LPPVIAKSPT STLGTPSTIA KPLRNFLKVI RIVSWSVAGV VLFLVLLTLV FCFHRKRETR LRQQKLKALI PLEHYTYAQV
0801: KRITKSFAEV VGRGGFGIVY KGTLSDGRVV AVKVLKDTKG NGEDFINEVA TMSRTSHLNI VSLLGFCSEG SKRAIIYEFL ENGSLDKFIL GKTSVNMDWT
0901: ALYRIALGVA HGLEYLHHSC KTRIVHFDIK PQNVLLDDSF CPKVSDFGLA KLCEKKESIL SMLDTRGTIG YIAPEMISRV YGNVSHKSDV YSYGMLVLEI
1001: IGARNKEKAN QACASNTSSM YFPEWVYRDL ESCKSGRHIE DGINSEEDEL AKKMTLVGLW CIQPSPVDRP AMNRVVEMME GSLEALEVPP RPVLQQIPIS
1101: NLHESSILSE DVSVYTEG
Arabidopsis Description
SNC4suppressor of npr1-1 constitutive 4 [Source:TAIR;Acc:AT1G66980]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.