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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86807 Canola cytosol 30.08 99.13
CDY72472 Canola mitochondrion 45.78 92.29
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 84.3 86.0
Bra034037.1-P Field mustard extracellular, vacuole 73.61 77.93
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 51.06 77.4
AT4G26690.1 Thale cress extracellular, vacuole 75.73 75.63
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 71.37 75.45
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 74.54 74.64
Bra034040.1-P Field mustard extracellular 13.32 74.26
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 67.94 67.94
Bra028979.1-P Field mustard plasma membrane 65.7 65.01
PGSC0003DMT400033423 Potato extracellular 9.89 57.25
Solyc12g014570.1.1 Tomato nucleus 54.22 54.73
KRG98625 Soybean extracellular 52.11 54.71
PGSC0003DMT400057418 Potato extracellular 54.22 54.58
Bra035208.1-P Field mustard extracellular, golgi, plastid 19.66 54.58
Solyc07g065120.2.1 Tomato extracellular 54.09 54.45
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 54.35 54.43
KRH46279 Soybean extracellular 51.98 54.2
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.56 53.92
KRH73850 Soybean endoplasmic reticulum 53.43 53.78
KRH14296 Soybean endoplasmic reticulum 53.3 53.58
KRH46281 Soybean extracellular, golgi, plasma membrane 53.03 52.83
KRH46282 Soybean extracellular, plasma membrane 51.32 51.12
KRH46280 Soybean cytosol 17.68 50.95
KRG98622 Soybean extracellular, golgi, plasma membrane 49.47 50.07
GSMUA_Achr8P25690_001 Banana plasma membrane 49.6 49.47
TraesCS2D01G332500.1 Wheat golgi 47.76 48.66
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.62 48.65
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 47.63 48.52
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 47.63 48.52
HORVU2Hr1G081920.3 Barley plasma membrane 47.63 48.52
GSMUA_AchrUn_... Banana extracellular 10.42 48.17
TraesCS6A01G200600.1 Wheat golgi 47.49 48.13
TraesCS6B01G226700.2 Wheat golgi 47.36 48.06
TraesCS6D01G189300.1 Wheat unclear 47.36 48.06
EES05342 Sorghum plasma membrane 47.63 47.94
Zm00001d050917_P002 Maize plasma membrane 47.49 47.81
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.1 47.54
EES10974 Sorghum golgi 46.97 47.53
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 49.21 47.46
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.63 47.19
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 58.97 46.37
Zm00001d017036_P002 Maize plasma membrane 46.7 45.85
TraesCS7A01G243900.3 Wheat golgi 46.04 45.38
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 44.85 45.03
Bra020384.1-P Field mustard extracellular, plasma membrane 44.85 44.97
KXG36695 Sorghum plasma membrane 45.78 44.77
TraesCS7B01G147500.1 Wheat unclear 45.51 44.69
Zm00001d025670_P001 Maize mitochondrion 8.97 44.44
Bra020395.1-P Field mustard plasma membrane 43.67 44.31
Zm00001d052875_P001 Maize mitochondrion 44.72 43.69
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.72 43.63
Bra006785.1-P Field mustard extracellular, plasma membrane 44.33 43.35
Bra035774.1-P Field mustard plasma membrane 46.31 42.96
Zm00001d031412_P001 Maize extracellular 42.22 42.95
GSMUA_Achr3P03920_001 Banana cytosol 44.59 42.78
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.65 42.72
Bra001790.1-P Field mustard plasma membrane 45.12 40.91
OQU80956 Sorghum cytosol 46.44 39.77
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.72 36.11
Bra003814.1-P Field mustard golgi 11.87 23.02
Bra015928.1-P Field mustard extracellular, golgi, vacuole 11.74 22.65
Bra003813.1-P Field mustard cytosol 11.74 21.6
Bra009316.1-P Field mustard extracellular, vacuole 10.42 21.24
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra035244EnsemblPlants:Bra035244.1EnsemblPlants:Bra035244.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4F2E6PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI0002546B1B
SEG:seg:::::
Description
AT4G26690 (E=0.0) SHV3, MRH5, GPDL2 | SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA08:-:9520844..9524121
Molecular Weight (calculated)
82964.4 Da
IEP (calculated)
5.013
GRAVY (calculated)
-0.046
Length
758 amino acids
Sequence
(BLAST)
001: MPTSTVLLCC VVLIQLFAGQ TDARSSSPWQ TLSGDAPLVI ARGGFSGLFP DSSLNAYSFA VQTSVPGSAL WCDVQLTKDG AGICFPDLKL NNASTVEYVY
101: PNRQKSYPVN GVSTQGWFTI DFSLRDLNDV SLIRGILSRT EKFDGIYPIL TVEDVTTQIK PESFWLNVQH DAFFEQQNLS MSKFLISASR IVSINYISSP
201: EVNFFTKISG RFGRNGPLFV FQFLRKEDIE PTTNQTYGSI LSNLTFVKTF ASGILVPKSY ILPLDDKQYL VPPPKSLVQD AHKAGLQVYV SGFANDIDIA
301: HDYSSDPVSE YLSFVDNGNF SVDGVLSDFP LTASSSIDCF SHLGQNAIKQ VNFLVISKNG ASGDYPGCTD LAYDKAIKDG ADVIDCSVQM SSDGVPFCSR
401: SIDLSNSTMI SQTPFAQRST LVPEISSSGG IYTFSLTWAE IRNLTPAIGN PYRSYTMFRN PNKKNSGKLI LLSEFLNLAN NSTLLSGVLI SVENAVYLRE
501: KQGLDVVKAV LDTLTETGYG NGTTKTKVMI QSTNSSVLVE FKKQSKYEAV YKVDEKISDI SDSAIEDIKK FANAVVIGKE SVFSLLDSFI TRQTNVVEKL
601: QKSKLPVYVE LFQNEFVSQP YDFFSDPTVE INSYILGAGI NGTITEFPFT AARYKRNRCL GTQETLPPYM APFKPGSLLQ AVNAIPPAQA PNPVFTDDDV
701: TEPPLPPVTA KSPTSSPGTS FTNAQAPRPS GQTRLTLSLR FSVFASLLLL WISSPLCS
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.