Factsheet for Bra003814.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68196	Canola	golgi	97.44	95.97
Bra003813.1-P	Field mustard	cytosol	88.75	84.22
Bra015928.1-P	Field mustard	extracellular, golgi, vacuole	83.89	83.46
KRH03139	Soybean	extracellular, golgi	72.12	72.68
KRH56805	Soybean	nucleus	72.12	71.94
Bra009316.1-P	Field mustard	extracellular, vacuole	67.52	70.97
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	70.84	70.13
Solyc06g069470.2.1	Tomato	extracellular	68.8	68.8
PGSC0003DMT400010411	Potato	extracellular, golgi	68.54	68.54
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	67.77	68.12
Os01t0763600-01	Rice	extracellular	65.73	65.73
Zm00001d012677_P012	Maize	golgi	65.47	65.47
HORVU3Hr1G073870.1	Barley	extracellular, golgi	65.47	65.47
EES01511	Sorghum	extracellular, golgi	65.47	65.47
TraesCS3A01G302700.1	Wheat	extracellular, golgi	65.47	65.47
TraesCS3B01G333600.1	Wheat	extracellular, golgi	65.47	65.47
TraesCS3D01G299100.1	Wheat	extracellular, golgi	65.47	65.47
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	23.02	12.11
Bra034037.1-P	Field mustard	extracellular, vacuole	21.99	12.01
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	23.27	12.01
Bra035244.1-P	Field mustard	plasma membrane	23.02	11.87
Bra020395.1-P	Field mustard	plasma membrane	22.25	11.65
Bra020384.1-P	Field mustard	extracellular, plasma membrane	22.51	11.64
Bra028979.1-P	Field mustard	plasma membrane	22.51	11.49
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.97	11.44
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.99	11.36
Bra002676.1-P	Field mustard	extracellular, golgi, plasma membrane	21.48	11.13
Bra006785.1-P	Field mustard	extracellular, plasma membrane	21.74	10.97
Bra035774.1-P	Field mustard	plasma membrane	22.76	10.89
Bra001790.1-P	Field mustard	plasma membrane	20.46	9.57
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	12.02	9.4
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.97	8.51
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	3.58	5.13
Os01t0763700-01	Rice	plastid	0.0	0.0
Bra034040.1-P	Field mustard	extracellular	0.0	0.0
Bra015910.1-P	Field mustard	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EnsemblPlantsGene:Bra003814	EnsemblPlants:Bra003814.1	EnsemblPlants:Bra003814.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395	UniProt:M4CHY1	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51257	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM
UniParc:UPI00025416BA	:	:	:	:	:

Description

AT1G74210 (E=5e-204) | glycerophosphoryl diester phosphodiesterase family protein

Coordinates

chrA07:-:15187540..15189747

Molecular Weight (calculated)

44825.3 Da

IEP (calculated)

7.294

GRAVY (calculated)

-0.369

Length

391 amino acids

Sequence
(BLAST)

001: MILTRCLPLI WLFLLTACAG RTLYPLPGKG GKSAKLPIQT LRPYNIAHRG SNGEIPEETA AAYLRAIEEG ADFIETDVLS SKDGVLICFH DYTLDETTNV
101: ASHKEFADRN RTYEVQGSNK TGFFTFDFTL KELKKLRTKQ RFSFRDQQYN GKYPIITFEE FITIAQDAPR VVGIYPEIKN PVLVNQHVKW PGGKRFEDKV
201: VETLKKYGYG GSYLSKKWLK RPLFIQSFAP SSLVYISNLI DSPKVLLIDD VTILTEDTNQ TYAEITSDVY FNYIKQYVVG IGPWKDTVVQ VSNNYTQAPT
301: DLVKRAHVHN LQVHPYTYRN ENEFLHLNFS QDPYKEYEYW INEIGVDGLF TDFTGSLHNY QEWTSPLSET SKSPRQLLGQ IASLVLPYTK A

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.