Factsheet for VIT_17s0000g07450.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03139	Soybean	extracellular, golgi	76.71	78.09
KRH56805	Soybean	nucleus	77.47	78.06
Solyc06g069470.2.1	Tomato	extracellular	75.44	76.21
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	74.94	76.09
PGSC0003DMT400010411	Potato	extracellular, golgi	75.19	75.96
Bra009316.1-P	Field mustard	extracellular, vacuole	70.13	74.46
CDX69980	Canola	extracellular, golgi, vacuole	69.87	74.19
CDX99041	Canola	extracellular	69.62	73.73
TraesCS3D01G299100.1	Wheat	extracellular, golgi	71.9	72.63
TraesCS3B01G333600.1	Wheat	extracellular, golgi	71.9	72.63
TraesCS3A01G302700.1	Wheat	extracellular, golgi	71.65	72.38
HORVU3Hr1G073870.1	Barley	extracellular, golgi	71.65	72.38
Zm00001d012677_P012	Maize	golgi	71.14	71.87
Os01t0763600-01	Rice	extracellular	71.14	71.87
AT5G08030.2	Thale cress	golgi	70.13	71.58
EES01511	Sorghum	extracellular, golgi	70.38	71.1
Bra003814.1-P	Field mustard	golgi	70.13	70.84
CDY11071	Canola	extracellular, golgi	69.62	70.33
AT1G74210.1	Thale cress	extracellular	69.62	70.15
CDX68196	Canola	golgi	69.62	69.27
CDX73068	Canola	extracellular	68.86	68.86
Bra015928.1-P	Field mustard	extracellular, golgi, vacuole	67.85	68.19
Bra003813.1-P	Field mustard	cytosol	69.87	66.99
CDX68195	Canola	peroxisome	69.62	66.75
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	67.59	63.57
CDX85815	Canola	mitochondrion	46.08	62.98
CDX85814	Canola	extracellular	27.59	55.61
VIT_11s0206g00140.t01	Wine grape	plasma membrane	22.03	11.6
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	21.52	11.23
Os01t0763700-01	Rice	plastid	0.25	0.66

Protein Annotations

EntrezGene:100260480	wikigene:100260480	Gene3D:3.20.20.190	MapMan:35.1	ProteinID:CBI15108	ProteinID:CBI15108.3
UniProt:D7SHZ8	EMBL:FN594950	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395
EntrezGene:LOC100260480	wikigene:LOC100260480	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620
PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM	TIGR:TC67192	UniParc:UPI000198515A	ArrayExpress:VIT_17s0000g07450
EnsemblPlantsGene:VIT_17s0000g07450	EnsemblPlants:VIT_17s0000g07450.t01	unigene:Vvi.11843	RefSeq:XP_002283945	RefSeq:XP_002283945.1	SEG:seg

Description

No Description!

Coordinates

chr17:-:8388675..8394468

Molecular Weight (calculated)

45374.2 Da

IEP (calculated)

4.864

GRAVY (calculated)

-0.377

Length

395 amino acids

Sequence
(BLAST)

001: MGSFWFGPSV FLLLIVGCAA RPFYPLPSKV DARDRLPLQT SRPYNVAHRG SNGELPEETA AAYMRAIEEG ADFIETDILA SKDGALICFH DVTLDDTTDI
101: AEHKEFADRR TTYEVQGLNT TGWFSVDFTL EELKTLRVNQ RYKFRDQQYN GKFTIITFEE FISIALDAPR VVGIYPEIKN PVFINQRVKW PDGKRFEDHF
201: VATLKKYGYK GSYMSEDWLK QPVFIQSFAP TSLIYISNQT NLPKIFLIDD VTVPTQDTNQ SYWEITSDSY LSFIKQYVVG IGPWKDTVVP VVDNYLQTPT
301: DLVAKAHAHD LQVHPYTYRN ENQFLHFNFH QDPYAEYDYW INKIGVDGLF TDFTGSLYNF QEWTSPLSQD DGDDDGNAAK LLHKIATLVS PYRKG

Best Arabidopsis Sequence Match ( AT5G08030.1 )
(BLAST)

001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.