CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	94.43	88.81
AT1G74210.1	Thale cress	extracellular	86.08	86.73
CDY11071	Canola	extracellular, golgi	82.53	83.38
CDX68196	Canola	golgi	82.78	82.37
CDX68195	Canola	peroxisome	81.77	78.4
CDX85815	Canola	mitochondrion	53.42	73.01
KRH56805	Soybean	nucleus	71.14	71.68
KRH03139	Soybean	extracellular, golgi	69.87	71.13
CDX99041	Canola	extracellular	67.09	71.05
CDX69980	Canola	extracellular, golgi, vacuole	66.84	70.97
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	69.11	70.18
PGSC0003DMT400010411	Potato	extracellular, golgi	69.37	70.08
Solyc06g069470.2.1	Tomato	extracellular	69.11	69.82
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	68.86	68.86
TraesCS3A01G302700.1	Wheat	extracellular, golgi	66.08	66.75
TraesCS3D01G299100.1	Wheat	extracellular, golgi	65.82	66.5
TraesCS3B01G333600.1	Wheat	extracellular, golgi	65.82	66.5
HORVU3Hr1G073870.1	Barley	extracellular, golgi	65.82	66.5
EES01511	Sorghum	extracellular, golgi	64.56	65.22
Zm00001d012677_P012	Maize	golgi	64.56	65.22
Os01t0763600-01	Rice	extracellular	64.3	64.96
CDX85814	Canola	extracellular	30.13	60.71
CDY12599	Canola	cytosol	20.0	19.36
CDX82242	Canola	cytosol	20.76	18.51
CDY42328	Canola	cytosol	10.89	16.67
CDY29432	Canola	cytosol, peroxisome	23.54	15.6
CDY11832	Canola	cytosol, peroxisome, plastid	5.82	15.03
CDX86807	Canola	cytosol	8.61	14.78
CDY45656	Canola	extracellular, golgi, plasma membrane	21.77	13.17
CDX86766	Canola	plasma membrane	20.76	12.95
CDY19634	Canola	plasma membrane	23.29	12.67
CDY58867	Canola	plasma membrane	22.28	12.19
CDY12605	Canola	extracellular, vacuole	21.77	12.01
CDY61647	Canola	extracellular, plasma membrane	22.78	11.92
CDY32730	Canola	plasma membrane	21.77	11.54
CDY17323	Canola	plasma membrane	22.28	11.46
CDX92806	Canola	extracellular, plasma membrane, vacuole	20.76	11.45
CDY46687	Canola	extracellular, plasma membrane, vacuole	20.76	11.44
CDY72472	Canola	mitochondrion	10.89	11.44
CDY13237	Canola	extracellular, plasma membrane, vacuole	21.77	11.33
CDY02788	Canola	plasma membrane	21.27	11.28
CDY02800	Canola	extracellular, plasma membrane, plastid	21.27	11.23
CDY32720	Canola	extracellular, plastid, vacuole	21.27	11.17
CDX88656	Canola	plasma membrane	21.77	11.1
CDX94294	Canola	extracellular, plasma membrane, vacuole	21.27	11.1
CDX89312	Canola	extracellular, plasma membrane, vacuole	21.27	11.1
CDY43885	Canola	extracellular, golgi, plasma membrane	21.01	11.05
CDY11996	Canola	plasma membrane	21.52	11.0
CDY36746	Canola	plasma membrane	21.27	10.97
CDY36036	Canola	plasma membrane	22.28	10.37
CDY11831	Canola	extracellular, vacuole	11.39	7.95
CDY60415	Canola	plasma membrane	20.76	6.91
CDY14478	Canola	plasma membrane	21.77	6.54
CDY71959	Canola	extracellular, plastid, vacuole	1.77	2.13
Os01t0763700-01	Rice	plastid	0.0	0.0
CDY60410	Canola	extracellular	0.0	0.0
CDX86765	Canola	extracellular, mitochondrion, vacuole	0.0	0.0
CDY12601	Canola	extracellular	0.0	0.0
CDX71386	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078CDS0	EnsemblPlants:CDX73068	ProteinID:CDX73068	ProteinID:CDX73068.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00103517001	InterPro:IPR017946	InterPro:IPR030395	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM
UniParc:UPI0004EF0A09	:	:	:	:	:

Description

BnaC06g35160D

Coordinates

chrLK031797:+:1928369..1930953

Molecular Weight (calculated)

45446.0 Da

IEP (calculated)

6.910

GRAVY (calculated)

-0.397

Length

395 amino acids

Sequence
(BLAST)

001: MSYQHCECLP LIWLSLVTLC AGRTLYQLPG KGVKDDTKQP IQTSRPFNIA HRGSNGEIPE ETKAAYLRAI EEGTDFIETD ILSSKDGVLI CFHDVILDLT
101: TDVASRKEFA DRNRTYDVQG FKITGFFTFD FTLKELKTLR TKQRYAFRDQ QYNGKYPIIT FEEFLAIARD APRVVGIYPE IKNPVLMNQH VKWPGGKRFE
201: DKVVETLKKH GYGGAYLSKQ WLNKPLFIQS FAPSSLVYIS NLTDSPKVLL IDDVTMPTQD TNQTYAEITS DTYFTYIKEY VVGIGPWKDT IVPVTNNYML
301: TPTDLVKRAH AHNLQVHPYT YRNENQFLHF NFSQDPYMEY EYWIKEIGVD GLFTDFTGSL HNYQEWASPL PDTSSKSTRQ LLSHIASLVR PYAKA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.