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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86807 Canola cytosol 56.59 63.48
PGSC0003DMT400033459 Potato endoplasmic reticulum 38.37 38.22
CDY12599 Canola cytosol 59.3 37.5
CDY11832 Canola cytosol, peroxisome, plastid 20.93 35.29
CDY12605 Canola extracellular, vacuole 83.72 30.17
CDY45656 Canola extracellular, golgi, plasma membrane 67.44 26.65
CDY46687 Canola extracellular, plasma membrane, vacuole 71.71 25.8
CDX92806 Canola extracellular, plasma membrane, vacuole 70.93 25.56
CDY61647 Canola extracellular, plasma membrane 73.64 25.17
CDY13237 Canola extracellular, plasma membrane, vacuole 72.09 24.51
CDX94294 Canola extracellular, plasma membrane, vacuole 71.32 24.31
CDX89312 Canola extracellular, plasma membrane, vacuole 70.54 24.04
AT4G26690.1 Thale cress extracellular, vacuole 69.77 23.72
CDX86766 Canola plasma membrane 57.36 23.38
CDY17323 Canola plasma membrane 67.83 22.79
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 3.1 22.22
CDX82242 Canola cytosol 37.98 22.12
CDY36746 Canola plasma membrane 64.73 21.8
CDY58867 Canola plasma membrane 58.53 20.91
CDY11996 Canola plasma membrane 58.53 19.53
PGSC0003DMT400033423 Potato extracellular 8.91 17.56
CDY29432 Canola cytosol, peroxisome 39.92 17.28
KRH73850 Soybean endoplasmic reticulum 49.61 17.0
KRH14296 Soybean endoplasmic reticulum 49.61 16.98
KRH46281 Soybean extracellular, golgi, plasma membrane 47.67 16.16
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 47.29 16.12
KRH46282 Soybean extracellular, plasma membrane 47.29 16.03
KRH46279 Soybean extracellular 44.96 15.96
PGSC0003DMT400057418 Potato extracellular 46.51 15.94
PGSC0003DMT400033463 Potato extracellular, plasma membrane 46.51 15.94
Solyc12g014570.1.1 Tomato nucleus 46.12 15.85
Solyc07g065120.2.1 Tomato extracellular 45.74 15.67
KRG98625 Soybean extracellular 43.8 15.65
GSMUA_Achr8P25690_001 Banana plasma membrane 45.74 15.53
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 44.96 15.45
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 46.51 15.27
KRG98622 Soybean extracellular, golgi, plasma membrane 43.8 15.09
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 44.19 14.9
TraesCS6A01G200600.1 Wheat golgi 43.02 14.84
TraesCS6D01G189300.1 Wheat unclear 42.25 14.59
EES05342 Sorghum plasma membrane 42.25 14.48
Zm00001d050917_P002 Maize plasma membrane 42.25 14.48
TraesCS6B01G226700.2 Wheat golgi 41.86 14.46
Zm00001d017036_P002 Maize plasma membrane 43.02 14.38
HORVU2Hr1G081920.3 Barley plasma membrane 41.09 14.25
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 41.09 14.25
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 41.09 14.25
EES10974 Sorghum golgi 41.09 14.15
TraesCS2D01G332500.1 Wheat golgi 40.7 14.11
CDY19634 Canola plasma membrane 39.53 14.05
GSMUA_Achr3P03920_001 Banana cytosol 41.09 13.42
CDX85815 Canola mitochondrion 14.73 13.15
CDY32720 Canola extracellular, plastid, vacuole 37.98 13.03
Zm00001d022153_P006 Maize extracellular, mitochondrion 39.15 13.0
CDY14478 Canola plasma membrane 65.5 12.86
CDY02800 Canola extracellular, plasma membrane, plastid 37.21 12.83
TraesCS7B01G147500.1 Wheat unclear 38.37 12.82
CDY60415 Canola plasma membrane 58.91 12.82
KXG36695 Sorghum plasma membrane 38.37 12.77
CDX88656 Canola plasma membrane 37.98 12.65
TraesCS7A01G243900.3 Wheat golgi 37.6 12.61
CDY43885 Canola extracellular, golgi, plasma membrane 36.43 12.52
CDY02788 Canola plasma membrane 36.05 12.48
Zm00001d052875_P001 Maize mitochondrion 37.21 12.37
CDY32730 Canola plasma membrane 35.66 12.35
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 38.76 12.35
OQU80956 Sorghum cytosol 39.15 11.41
CDY36036 Canola plasma membrane 36.82 11.19
CDX99041 Canola extracellular 15.89 10.99
CDX73068 Canola extracellular 16.67 10.89
Zm00001d031412_P001 Maize extracellular 31.4 10.87
CDX69980 Canola extracellular, golgi, vacuole 15.5 10.75
CDY11071 Canola extracellular, golgi 16.28 10.74
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 17.05 10.48
CDX68195 Canola peroxisome 16.67 10.44
CDY72472 Canola mitochondrion 15.12 10.37
CDX68196 Canola golgi 15.5 10.08
CDY11831 Canola extracellular, vacuole 8.53 3.89
GSMUA_AchrUn_... Banana extracellular 2.33 3.66
CDX85814 Canola extracellular 1.55 2.04
CDY60410 Canola extracellular 0.78 1.47
CDY12601 Canola extracellular 0.78 1.47
KRH46280 Soybean cytosol 0.0 0.0
CDY71959 Canola extracellular, plastid, vacuole 0.0 0.0
CDX86765 Canola extracellular, mitochondrion, vacuole 0.0 0.0
Zm00001d025670_P001 Maize mitochondrion 0.0 0.0
CDX71386 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078HZW0UniProt:A0A078HZW0EnsemblPlants:CDY42328ProteinID:CDY42328
ProteinID:CDY42328.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00074572001InterPro:IPR017946InterPro:IPR030395
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695UniParc:UPI0004EE14FD
SEG:seg:::::
Description
BnaC02g17050DBnaC02g17050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZW0]
Coordinates
chrLK032521:+:8393..9447
Molecular Weight (calculated)
28598.2 Da
IEP (calculated)
9.211
GRAVY (calculated)
-0.234
Length
258 amino acids
Sequence
(BLAST)
001: MNPYRLYNMF RNPNEKNSGR IISLSEFLNL AKNSTSLSSV LISLEDAVYL REKQGSTKYE TVYKIEKNIG DISDSAIEDI KKFANAVVLR KSSVFPVADS
101: FVTGQTNVVE RLQKSKLLVY VKLFHNEFVS QPYDFFCDAT VEINTYITGA GLNGTITEFP LTAARYKRNQ CLGRKQTPSY MSPLKPGGLL SIVNPKSLPP
201: AEPPYLVFTA DDVTESPQPP ATEKSPSSST NAQTHRPSGH TRLTLSLCLS VFASLLLL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.