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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89312 Canola extracellular, plasma membrane, vacuole 98.41 98.41
CDY46687 Canola extracellular, plasma membrane, vacuole 81.24 85.77
CDX92806 Canola extracellular, plasma membrane, vacuole 80.85 85.47
AT4G26690.1 Thale cress extracellular, vacuole 81.11 80.9
CDY61647 Canola extracellular, plasma membrane 76.62 76.82
CDY12605 Canola extracellular, vacuole 71.86 75.98
CDY13237 Canola extracellular, plasma membrane, vacuole 74.5 74.31
CDY12599 Canola cytosol 39.63 73.53
CDX86807 Canola cytosol 22.19 73.04
CDY72472 Canola mitochondrion 36.06 72.61
CDY45656 Canola extracellular, golgi, plasma membrane 62.22 72.13
CDY42328 Canola cytosol 24.31 71.32
CDY17323 Canola plasma membrane 72.26 71.22
CDY60410 Canola extracellular 12.42 69.12
CDY36746 Canola plasma membrane 68.69 67.89
CDY12601 Canola extracellular 12.02 66.91
CDY11996 Canola plasma membrane 66.31 64.94
CDY71959 Canola extracellular, plastid, vacuole 27.34 63.11
CDY58867 Canola plasma membrane 56.54 59.28
PGSC0003DMT400033423 Potato extracellular 10.04 58.02
CDX86766 Canola plasma membrane 47.16 56.4
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 55.75 55.75
PGSC0003DMT400057418 Potato extracellular 54.95 55.25
Solyc12g014570.1.1 Tomato nucleus 54.69 55.13
Solyc07g065120.2.1 Tomato extracellular 54.82 55.11
KRH46281 Soybean extracellular, golgi, plasma membrane 55.22 54.93
KRH73850 Soybean endoplasmic reticulum 54.56 54.85
KRH14296 Soybean endoplasmic reticulum 54.16 54.38
KRG98625 Soybean extracellular 51.65 54.16
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.63 53.92
KRH46279 Soybean extracellular 51.39 53.51
KRH46282 Soybean extracellular, plasma membrane 53.24 52.96
KRH46280 Soybean cytosol 17.83 51.33
KRG98622 Soybean extracellular, golgi, plasma membrane 50.59 51.13
Zm00001d050917_P002 Maize plasma membrane 49.41 49.67
GSMUA_Achr8P25690_001 Banana plasma membrane 49.8 49.61
TraesCS6A01G200600.1 Wheat golgi 48.74 49.33
HORVU2Hr1G081920.3 Barley plasma membrane 48.48 49.33
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 48.35 49.19
EES05342 Sorghum plasma membrane 48.88 49.14
TraesCS6D01G189300.1 Wheat unclear 48.48 49.13
TraesCS2D01G332500.1 Wheat golgi 48.22 49.06
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.78 49.03
TraesCS6B01G226700.2 Wheat golgi 48.35 49.0
CDY29432 Canola cytosol, peroxisome 38.57 48.99
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 48.08 48.92
CDX82242 Canola cytosol 28.4 48.53
EES10974 Sorghum golgi 47.82 48.33
GSMUA_AchrUn_... Banana extracellular 10.44 48.17
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 48.61 48.1
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.69 48.07
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 49.8 47.96
CDY19634 Canola plasma membrane 45.97 47.93
Zm00001d017036_P002 Maize plasma membrane 48.35 47.41
Zm00001d025670_P001 Maize mitochondrion 9.38 46.41
CDY32720 Canola extracellular, plastid, vacuole 45.57 45.88
TraesCS7A01G243900.3 Wheat golgi 46.24 45.51
CDY02800 Canola extracellular, plasma membrane, plastid 44.65 45.19
CDY43885 Canola extracellular, golgi, plasma membrane 44.39 44.74
TraesCS7B01G147500.1 Wheat unclear 45.44 44.56
KXG36695 Sorghum plasma membrane 45.44 44.39
Zm00001d052875_P001 Maize mitochondrion 45.05 43.94
CDY32730 Canola plasma membrane 43.06 43.76
CDY02788 Canola plasma membrane 42.93 43.62
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.65 43.5
CDX88656 Canola plasma membrane 44.25 43.23
CDY11831 Canola extracellular, vacuole 32.1 42.93
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.44 42.47
GSMUA_Achr3P03920_001 Banana cytosol 43.99 42.15
Zm00001d031412_P001 Maize extracellular 41.48 42.15
CDY36036 Canola plasma membrane 47.16 42.05
CDY60415 Canola plasma membrane 65.26 41.65
CDY14478 Canola plasma membrane 72.26 41.63
CDX86765 Canola extracellular, mitochondrion, vacuole 8.72 39.76
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.85 38.89
OQU80956 Sorghum cytosol 45.44 38.87
CDX71386 Canola extracellular 9.64 38.62
CDY11832 Canola cytosol, peroxisome, plastid 7.66 37.91
CDY11071 Canola extracellular, golgi 11.62 22.51
CDX68196 Canola golgi 11.36 21.66
CDX73068 Canola extracellular 11.1 21.27
CDX69980 Canola extracellular, golgi, vacuole 10.44 21.24
CDX99041 Canola extracellular 10.44 21.18
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 11.49 20.71
CDX85814 Canola extracellular 5.28 20.41
CDX68195 Canola peroxisome 11.1 20.39
CDX85815 Canola mitochondrion 6.21 16.26
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078E0V8EnsemblPlants:CDX94294ProteinID:CDX94294ProteinID:CDX94294.1
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00157386001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
SignalP:SignalP-noTMUniParc:UPI0004EE7623SEG:seg:::
Description
BnaC01g18900D
Coordinates
chrLK031881:+:50391..53379
Molecular Weight (calculated)
82481.1 Da
IEP (calculated)
5.099
GRAVY (calculated)
-0.004
Length
757 amino acids
Sequence
(BLAST)
001: MRGLRASSLL LCGVVLIQLL AVQIDAQRPK THWKTLSGFS PRVIARGGFS GLFPDSSLDA YNFAMLTSVA DAVLWCDLQL TKDGAGICFP DLTMSNASNV
101: ETVYPKGQST YPVNGVPTPG WFTIDFSLRA LTNVSLIRGI LSRSDKFDGN GYTISTVQTI NKEMKPQGLW LNVQHDAFYA QHNLSMSNFL ISVTKTVIVD
201: FISSPEVNFF RKIAGRFGRE GPSFVFRFLE KEQFEPTTNR TYGSILSNLT FVKTFASGIL VPKSYVLPLD DKQYLLPSTS LVQDAHKAGL EVFVSGFAND
301: VDIAHDYSFD PVSEYLSFMD NGNFSVDGVL SDFPITASAS VECFSHVARN ATKQVDFLVI SKNGASGDYP GCTNLAYEKA INDGADVIDC SVQMSSDGKP
401: FCSSSIDLGN TTMVAQSPLR NRSTSVPEIS SVNGIYTFTL TWPEIQTLTP AISNPYSRRF NMFRNPNERN SGKLLSLSEF LNLAKNSTTL SGVLISVENA
501: AYLREKQGLD VVKAVLDALT ETGYSNRTTT KVMIQSTNSS VLVDFKKQSQ YETVYKVEET IRDILDSAIE DIKKFASAVV IGKSSVFPVV DGFVTGQTNV
601: VERLQKSQLP VYVELFQNEF VSQPFDFFSD ATVEINSYVT GPGINGTITE FPFTAARYRR NRCLASKETL SYMAPVQPGG LLEVVSPGSI PPAEAPNPVF
701: TDADVTEPPL PPVTAKAPTP TPGTPSTTAP APSGQTQLTL SLLLSVFAMV LASLLLM
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.