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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028979.1-P Field mustard plasma membrane 98.96 98.96
CDY11996 Canola plasma membrane 92.04 91.2
CDY17323 Canola plasma membrane 81.33 81.12
CDY71959 Canola extracellular, plastid, vacuole 33.68 78.66
CDY45656 Canola extracellular, golgi, plasma membrane 66.71 78.25
AT5G55480.1 Thale cress plasma membrane 78.2 78.2
CDY58867 Canola plasma membrane 67.62 71.75
CDX94294 Canola extracellular, plasma membrane, vacuole 67.89 68.69
CDX89312 Canola extracellular, plasma membrane, vacuole 67.75 68.56
CDY46687 Canola extracellular, plasma membrane, vacuole 64.1 68.48
CDX92806 Canola extracellular, plasma membrane, vacuole 63.71 68.16
CDX86766 Canola plasma membrane 56.14 67.93
CDY12605 Canola extracellular, vacuole 61.1 65.36
CDY61647 Canola extracellular, plasma membrane 64.36 65.3
CDY42328 Canola cytosol 21.8 64.73
CDY12599 Canola cytosol 34.33 64.46
CDY13237 Canola extracellular, plasma membrane, vacuole 63.58 64.16
CDX86807 Canola cytosol 19.06 63.48
CDY72472 Canola mitochondrion 30.81 62.77
CDY60410 Canola extracellular 10.84 61.03
CDY12601 Canola extracellular 10.71 60.29
CDX86765 Canola extracellular, mitochondrion, vacuole 12.92 59.64
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 54.83 55.48
KRH73850 Soybean endoplasmic reticulum 53.79 54.71
PGSC0003DMT400033423 Potato extracellular 9.27 54.2
KRH14296 Soybean endoplasmic reticulum 53.13 53.98
KRH46281 Soybean extracellular, golgi, plasma membrane 53.52 53.88
PGSC0003DMT400057418 Potato extracellular 52.48 53.39
Solyc07g065120.2.1 Tomato extracellular 52.35 53.25
Solyc12g014570.1.1 Tomato nucleus 51.96 53.0
PGSC0003DMT400033463 Potato extracellular, plasma membrane 51.57 52.46
KRH46280 Soybean cytosol 17.75 51.71
KRG98625 Soybean extracellular 48.69 51.66
KRH46282 Soybean extracellular, plasma membrane 51.31 51.64
KRH46279 Soybean extracellular 48.83 51.44
KRG98622 Soybean extracellular, golgi, plasma membrane 49.35 50.47
TraesCS6A01G200600.1 Wheat golgi 49.09 50.27
TraesCS6D01G189300.1 Wheat unclear 48.96 50.2
TraesCS2D01G332500.1 Wheat golgi 48.69 50.13
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 48.56 50.0
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 48.56 50.0
TraesCS6B01G226700.2 Wheat golgi 48.69 49.93
HORVU2Hr1G081920.3 Barley plasma membrane 48.3 49.73
CDY29432 Canola cytosol, peroxisome 38.64 49.66
CDY19634 Canola plasma membrane 46.87 49.45
Zm00001d050917_P002 Maize plasma membrane 48.43 49.27
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 49.09 49.15
EES05342 Sorghum plasma membrane 48.04 48.87
EES10974 Sorghum golgi 47.65 48.73
GSMUA_Achr8P25690_001 Banana plasma membrane 48.17 48.55
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 46.74 47.67
Zm00001d017036_P002 Maize plasma membrane 47.91 47.54
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.69 47.46
TraesCS7A01G243900.3 Wheat golgi 46.34 46.16
Zm00001d025670_P001 Maize mitochondrion 9.14 45.75
CDX82242 Canola cytosol 26.11 45.15
TraesCS7B01G147500.1 Wheat unclear 45.3 44.95
KXG36695 Sorghum plasma membrane 44.78 44.26
Zm00001d052875_P001 Maize mitochondrion 44.13 43.56
Zm00001d031412_P001 Maize extracellular 42.3 43.49
GSMUA_AchrUn_... Banana extracellular 9.27 43.29
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.86 43.24
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.56 43.09
GSMUA_Achr3P03920_001 Banana cytosol 43.86 42.53
CDY36036 Canola plasma membrane 47.13 42.52
PGSC0003DMT400033459 Potato endoplasmic reticulum 14.36 42.47
CDY32720 Canola extracellular, plastid, vacuole 41.12 41.89
CDY43885 Canola extracellular, golgi, plasma membrane 40.99 41.81
CDY02788 Canola plasma membrane 40.47 41.61
CDY32730 Canola plasma membrane 40.34 41.48
CDY02800 Canola extracellular, plasma membrane, plastid 40.47 41.44
CDX88656 Canola plasma membrane 41.64 41.16
CDY11831 Canola extracellular, vacuole 30.03 40.64
OQU80956 Sorghum cytosol 45.3 39.21
CDY11832 Canola cytosol, peroxisome, plastid 7.7 38.56
CDY60415 Canola plasma membrane 56.79 36.68
CDY14478 Canola plasma membrane 62.53 36.45
CDX71386 Canola extracellular 8.36 33.86
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.57 33.33
CDY11071 Canola extracellular, golgi 11.36 22.25
CDX68196 Canola golgi 11.36 21.91
CDX73068 Canola extracellular 10.97 21.27
CDX69980 Canola extracellular, golgi, vacuole 10.18 20.97
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 11.49 20.95
CDX99041 Canola extracellular 10.05 20.64
CDX85814 Canola extracellular 5.22 20.41
CDX68195 Canola peroxisome 10.97 20.39
CDX85815 Canola mitochondrion 6.66 17.65
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078HG63UniProt:A0A078HG63EnsemblPlants:CDY36746ProteinID:CDY36746
ProteinID:CDY36746.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00062569001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EEC82BSEG:seg::
Description
BnaA03g11400DBnaA03g11400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG63]
Coordinates
chrLK032383:+:88076..91495
Molecular Weight (calculated)
84457.1 Da
IEP (calculated)
5.564
GRAVY (calculated)
-0.052
Length
766 amino acids
Sequence
(BLAST)
001: MITSYMQDNP SMFVSRASKF LLSVLVLIQL LPTQLLAQRS KSPWQTLTGE APLVIARGGF SGLFPDSSFN AYSFVASTSA PDAVLWCDVQ LTKDGVGICF
101: PYVTMYNDSN VQDAYPKKKN SYLLNGVPTQ DWFTVDFTSR DLNTVFLTRG VLSRSNAFDN TQNVISTVQE VASEFKPAGF WLNVQHDAFY TQHNLSMSSF
201: LLTVSKTVII DYLSSPEVSF FRNIGGRFGK TGPKFVFRFL DKDDVEVSTN QTYGSLMKNL TFIKTFASGV LVPKSYIWPV KDQYLLPHTS FVRDAHTAGL
301: QVYGSGFAND FDIAYNYSYD PLAEYLSFMD NGDFSVDGFL SDFPSTASSA VDCFSHLGSN ASTQVDFLVI SKNGANGDYP GSTDLAYTKA IKDGADIIDC
401: AVQMSSDGIP FCLNSTNLGE SMNIVQTPFR NRSATVPEFN SLAGLYSFNL AWSEIQTLTP AISNPYSRNF HMFRNPRERS SGKLVSLSEF LNLANNSSSL
501: VGVLINVEHA AYLREKQGLD VVKAVLDTLK ESGYSYATKR VMIQSSNSSV LVDIKKQSRY ETVYQVEETI RDIQDSAIQD IKKFADAVVV GRFSLYPISA
601: SFITGQTNLV ERLQKFKLPV YVETFRNEFV SQAYDFLSDA TVEINTHVTG AGVSGTITEF PLTAARYKRN RCMARKDTPV YMIPVRPAGL LEIVSPTFLP
701: PAEAPNPVFT DADVTEPPLP PVTAKAPTTS PGPLPTDKKA PNGQTRVTLS VFLSAFDVVL ASLLLL
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.