CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68196	Canola	golgi	94.63	93.2
CDX68195	Canola	peroxisome	89.0	84.47
CDX73068	Canola	extracellular	83.38	82.53
CDX85815	Canola	mitochondrion	59.59	80.62
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	81.84	76.19
KRH03139	Soybean	extracellular, golgi	72.38	72.94
KRH56805	Soybean	nucleus	72.89	72.7
CDX69980	Canola	extracellular, golgi, vacuole	67.52	70.97
CDX99041	Canola	extracellular	67.52	70.78
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	70.33	69.62
Solyc06g069470.2.1	Tomato	extracellular	67.77	67.77
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	67.26	67.61
PGSC0003DMT400010411	Potato	extracellular, golgi	67.52	67.52
Os01t0763600-01	Rice	extracellular	65.22	65.22
TraesCS3A01G302700.1	Wheat	extracellular, golgi	65.22	65.22
Zm00001d012677_P012	Maize	golgi	64.96	64.96
TraesCS3B01G333600.1	Wheat	extracellular, golgi	64.96	64.96
TraesCS3D01G299100.1	Wheat	extracellular, golgi	64.96	64.96
HORVU3Hr1G073870.1	Barley	extracellular, golgi	64.96	64.96
EES01511	Sorghum	extracellular, golgi	64.96	64.96
CDX85814	Canola	extracellular	30.69	61.22
CDY12599	Canola	cytosol	20.72	19.85
CDX82242	Canola	cytosol	20.97	18.51
CDY42328	Canola	cytosol	10.74	16.28
CDY29432	Canola	cytosol, peroxisome	23.79	15.6
CDX86807	Canola	cytosol	8.95	15.22
CDY11832	Canola	cytosol, peroxisome, plastid	5.63	14.38
CDY45656	Canola	extracellular, golgi, plasma membrane	23.02	13.78
CDX86766	Canola	plasma membrane	20.97	12.95
CDY19634	Canola	plasma membrane	23.53	12.67
CDY61647	Canola	extracellular, plasma membrane	24.04	12.45
CDY12605	Canola	extracellular, vacuole	22.51	12.29
CDY72472	Canola	mitochondrion	11.76	12.23
CDY58867	Canola	plasma membrane	22.25	12.05
CDY13237	Canola	extracellular, plasma membrane, vacuole	23.02	11.86
CDY17323	Canola	plasma membrane	23.27	11.85
CDY32730	Canola	plasma membrane	22.51	11.81
CDY02800	Canola	extracellular, plasma membrane, plastid	22.51	11.76
CDX92806	Canola	extracellular, plasma membrane, vacuole	21.48	11.73
CDY32720	Canola	extracellular, plastid, vacuole	22.51	11.7
CDX89312	Canola	extracellular, plasma membrane, vacuole	22.51	11.62
CDX94294	Canola	extracellular, plasma membrane, vacuole	22.51	11.62
CDY46687	Canola	extracellular, plasma membrane, vacuole	21.23	11.58
CDY02788	Canola	plasma membrane	21.99	11.54
CDY11996	Canola	plasma membrane	22.51	11.38
CDY36746	Canola	plasma membrane	22.25	11.36
CDX88656	Canola	plasma membrane	22.25	11.23
CDY43885	Canola	extracellular, golgi, plasma membrane	21.48	11.19
CDY36036	Canola	plasma membrane	22.51	10.37
CDY11831	Canola	extracellular, vacuole	11.51	7.95
CDY60415	Canola	plasma membrane	21.48	7.08
CDY14478	Canola	plasma membrane	23.27	6.93
CDY71959	Canola	extracellular, plastid, vacuole	2.05	2.44
CDX71386	Canola	extracellular	0.0	0.0
CDX86765	Canola	extracellular, mitochondrion, vacuole	0.0	0.0
Os01t0763700-01	Rice	plastid	0.0	0.0
CDY60410	Canola	extracellular	0.0	0.0
CDY12601	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078FCM9	UniProt:A0A078FCM9	EnsemblPlants:CDY11071	ProteinID:CDY11071
ProteinID:CDY11071.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00049032001	InterPro:IPR017946	InterPro:IPR030395
PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51257	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5
SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI0004EB56A1	SEG:seg	:	:

Description

BnaC06g23230DBnaC06g23230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCM9]

Coordinates

chrLK032009:-:2018..4351

Molecular Weight (calculated)

44793.4 Da

IEP (calculated)

8.048

GRAVY (calculated)

-0.355

Length

391 amino acids

Sequence
(BLAST)

001: MILTRCLPLI WLFLLTACAG RTLYPLPGKG GKGAKLPIQT SRPYNIAHRG SNGEIPEETA PAYLRAIEEG ADFIETDVLS TKDGVLICFH DFTLQNTTNV
101: ASHKEFADRN RTYEVQGSNM TGFFTFDFTL KELKKLRTKQ RFSFRNQQYN GKYPIITFEE FITIARDAPR VVGIYPEIKN PVLMNQHVKW PGGVRFEDKV
201: VETLKKYGYG GSYLSKKWLK RPLFIQSFAP SSLVYISNLI DSPKVLLIDD VTVLTEDTNQ TYAEITSDVY FNYIKQYVVG IGPWKDTVVP VSNNYTQAPT
301: DLVKRAHAHN LKVHPYTYRN ENEFLHLNFS QDPYKEYEYW INEIGVDGLF TDFTGSLHNY QEWTSPLSET SKSPRQLLSQ IAALVLPYEK A

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.