Factsheet for HORVU1Hr1G024870.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G114700.2	Wheat	extracellular	79.77	91.88
TraesCS1A01G113300.1	Wheat	extracellular	79.55	91.62
HORVU6Hr1G074900.1	Barley	cytosol	34.55	91.57
TraesCS1B01G133400.2	Wheat	extracellular	79.32	90.41
HORVU2Hr1G087820.3	Barley	cytosol	62.27	88.67
HORVU6Hr1G024750.1	Barley	extracellular, vacuole	16.14	86.59
Os03t0603600-01	Rice	extracellular	67.95	76.47
OQU91395	Sorghum	extracellular, plasma membrane	67.73	76.02
Zm00001d033187_P001	Maize	plastid	62.73	66.35
HORVU3Hr1G073870.1	Barley	extracellular, golgi	57.95	65.22
HORVU2Hr1G032670.2	Barley	cytosol	45.45	58.82
HORVU2Hr1G081920.3	Barley	plasma membrane	19.55	11.56
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	19.55	11.24
HORVU1Hr1G080970.22	Barley	extracellular, plasma membrane	20.23	10.96

Protein Annotations

EnsemblPlants:HORVU1Hr1G024870.4	EnsemblPlantsGene:HORVU1Hr1G024870	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	PFAM:PF03009	PFscan:PS51704
SUPFAM:SSF51695	UniParc:UPI000B460465	UniProt:A0A287EYD8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr1H:-:117662384..117665322

Molecular Weight (calculated)

50531.7 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.487

Length

440 amino acids

Sequence
(BLAST)

001: PAVRGDGRVD DDSAIGIFRA RPPLLKGFSG FDSDSDRWWW RLSLIGGEGT KEGGIRSAMD CLWHASVIAL VLLFLGGSDA NPAARRHGQL DVNHKKQPLQ
101: TSRPYNIAHR GSNGEIPEET SAAYLRAIEE GADFIETDIL ASKDGHLICF HDVTLENTTD IGNRTEFAAR KRTYEVQGAN MTGWFVVDFT LRELKSLRVK
201: QRYDFRDQQY NWKYDILTFD EFILIALHAD RVVGVYPEIK SPIFINQHVK WSGGKKFEDK FVETLLKYGY KGKYMSEDWL KKPLFIQSFA PTSLIYISNM
301: TNAPKLLLID ETTVPTQDTN QSYYEITSND YLTFIRKYVI GIGPWKDTII PPENNHLGPA TDLVARAHAL NLQVHPYTFR NENKFLHFNF HQDPYAEYEY
401: WVREIGVDAL FTDFTGSLHK YQEWTTPHQK KEKKCRGTPA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.