Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- mitochondrion 2
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012263 | Potato | cytosol | 91.78 | 62.62 |
| PGSC0003DMT400040030 | Potato | cytosol | 89.04 | 60.75 |
| Solyc04g058120.1.1 | Tomato | mitochondrion | 54.79 | 43.96 |
| PGSC0003DMT400064098 | Potato | cytosol | 32.88 | 30.77 |
| KRH74905 | Soybean | cytosol | 27.4 | 25.0 |
| PGSC0003DMT400000156 | Potato | mitochondrion | 87.67 | 18.44 |
| CDY48919 | Canola | endoplasmic reticulum | 78.08 | 18.1 |
| HORVU7Hr1G023500.1 | Barley | cytosol | 26.03 | 17.92 |
| PGSC0003DMT400021594 | Potato | cytosol | 23.29 | 16.83 |
| PGSC0003DMT400016646 | Potato | mitochondrion | 78.08 | 16.24 |
| VIT_15s0046g02300.t01 | Wine grape | mitochondrion | 80.82 | 15.9 |
| Bra014436.1-P | Field mustard | mitochondrion | 79.45 | 15.76 |
| CDX89116 | Canola | mitochondrion | 79.45 | 15.76 |
| CDY43932 | Canola | mitochondrion | 79.45 | 15.76 |
| Bra007604.1-P | Field mustard | mitochondrion | 78.08 | 15.49 |
| CDX71737 | Canola | mitochondrion | 78.08 | 15.49 |
| KRH00797 | Soybean | mitochondrion | 78.08 | 15.32 |
| AT3G61440.1 | Thale cress | mitochondrion | 76.71 | 15.22 |
| KRH40428 | Soybean | mitochondrion | 76.71 | 15.01 |
| GSMUA_Achr5P19480_001 | Banana | mitochondrion | 71.23 | 14.48 |
| VIT_04s0044g00250.t01 | Wine grape | mitochondrion | 68.49 | 13.93 |
| Zm00001d004413_P002 | Maize | mitochondrion | 69.86 | 13.35 |
| TraesCS5B01G300800.1 | Wheat | mitochondrion | 68.49 | 13.23 |
| TraesCS5A01G300400.1 | Wheat | mitochondrion | 68.49 | 13.16 |
| Os04t0165700-01 | Rice | mitochondrion | 67.12 | 13.0 |
| EES11801 | Sorghum | mitochondrion | 68.49 | 12.95 |
| HORVU2Hr1G000280.3 | Barley | golgi, peroxisome, plastid | 67.12 | 10.75 |
| PGSC0003DMT400080490 | Potato | cytosol, mitochondrion, nucleus, plastid | 19.18 | 10.61 |
| PGSC0003DMT400059624 | Potato | cytosol, plastid | 54.79 | 10.36 |
| PGSC0003DMT400082113 | Potato | cytosol | 45.21 | 10.15 |
| PGSC0003DMT400057393 | Potato | plastid | 32.88 | 5.71 |
| CDY68838 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00460+4.4.1.9 | Gene3D:3.40.50.1100 | MapMan:35.1 | InterPro:CAS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004124 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019344 |
| GO:GO:0019499 | GO:GO:0050017 | UniProt:M1B0C3 | EnsemblPlantsGene:PGSC0003DMG400013157 | PGSC:PGSC0003DMG400013157 | EnsemblPlants:PGSC0003DMT400034224 |
| PANTHER:PTHR10314 | PANTHER:PTHR10314:SF80 | SUPFAM:SSF53686 | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI000296B507 | : |
Description
Cysteine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400013157]
Coordinates
chr2:+:33524798..33525337
Molecular Weight (calculated)
8406.9 Da
IEP (calculated)
4.675
GRAVY (calculated)
-0.568
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MRGTVKKAYE LLESTPNAFM LQQFYNPANT QDHFDTTSLE IWEETLGPHQ ITGNGVGFKP DILDMDLMVE HRH
001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV SVLMMYRDSL FVCFLVVSMD NNL
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV SVLMMYRDSL FVCFLVVSMD NNL
Arabidopsis Description
CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.