Factsheet for GSMUA_Achr5P19480_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74905	Soybean	cytosol	17.55	78.75
Os04t0165700-01	Rice	mitochondrion	82.45	78.51
Zm00001d004413_P002	Maize	mitochondrion	80.78	75.92
EES11801	Sorghum	mitochondrion	81.62	75.91
PGSC0003DMT400000156	Potato	mitochondrion	72.7	75.22
TraesCS5B01G300800.1	Wheat	mitochondrion	78.55	74.6
TraesCS5A01G300400.1	Wheat	mitochondrion	77.99	73.68
Solyc10g012370.2.1	Tomato	mitochondrion	71.87	73.5
Solyc01g094790.2.1	Tomato	plastid	72.14	72.55
KRH40428	Soybean	mitochondrion	75.21	72.39
PGSC0003DMT400016646	Potato	mitochondrion	70.75	72.36
KRH00797	Soybean	mitochondrion	74.65	72.04
VIT_15s0046g02300.t01	Wine grape	mitochondrion	74.37	71.97
PGSC0003DMT400034224	Potato	cytosol	14.48	71.23
Bra007604.1-P	Field mustard	mitochondrion	72.14	70.38
Bra014436.1-P	Field mustard	mitochondrion	72.14	70.38
CDX89116	Canola	mitochondrion	72.14	70.38
CDY43932	Canola	mitochondrion	72.14	70.38
CDX71737	Canola	mitochondrion	71.87	70.11
AT3G61440.1	Thale cress	mitochondrion	71.59	69.84
HORVU7Hr1G023500.1	Barley	cytosol	20.61	69.81
VIT_04s0044g00250.t01	Wine grape	mitochondrion	69.64	69.64
CDY48919	Canola	endoplasmic reticulum	61.0	69.52
PGSC0003DMT400021594	Potato	cytosol	19.5	69.31
PGSC0003DMT400064098	Potato	cytosol	14.21	65.38
PGSC0003DMT400040030	Potato	cytosol	18.94	63.55
PGSC0003DMT400012263	Potato	cytosol	18.66	62.62
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	78.27	61.62
GSMUA_Achr11P...	Banana	cytosol	55.43	61.42
GSMUA_Achr9P25760_001	Banana	cytosol	54.04	59.88
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	54.04	59.69
Solyc04g058120.1.1	Tomato	mitochondrion	15.04	59.34
GSMUA_Achr4P21350_001	Banana	cytosol	52.09	57.54
GSMUA_Achr5P17120_001	Banana	plastid	54.32	50.78
GSMUA_Achr9P02430_001	Banana	plastid	53.48	50.53
GSMUA_Achr2P16640_001	Banana	cytosol	47.35	50.0
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	16.43	44.7
CDY68838	Canola	mitochondrion	15.04	39.71
GSMUA_Achr8P00260_001	Banana	mitochondrion	48.19	39.5
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	29.25	24.31

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	InterPro:CAS
InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344
GO:GO:0019499	GO:GO:0050017	EnsemblPlantsGene:GSMUA_Achr5G19480_001	EnsemblPlants:GSMUA_Achr5P19480_001	EnsemblPlants:GSMUA_Achr5T19480_001	UniProt:M0SZX7
InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF80
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000294EE56	SEG:seg

Description

Cysteine synthase, chloroplastic/chromoplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G19480_001]

Coordinates

chr5:+:21138283..21141430

Molecular Weight (calculated)

38783.3 Da

IEP (calculated)

8.372

GRAVY (calculated)

-0.131

Length

359 amino acids

Sequence
(BLAST)

001: MELVRRGRSG LHLLRMASPF STQQAVDPAV ASPNLKDLSG LRINKEATQL IGRTPMVYLN KVTEGCHAQI AAKLEYLQPS FSVKDRPAVA MIEDAEKNGL
101: ITPGKTTLIE PTSGNMGIGL SFMAALKGYK LVLTMPSYTS LERRVTMRAF GANLVLTDPT KGMGGTVKKA YQLMESYPDA FMLQQFENPA NVKVHFETTG
201: PEIWDDTLGQ VDIFVMGIGS GGTVTGVGQY LKSKNPNVKI YGVEPAESNI LNGGQPGPHL ITGNGVGFKP KILDMDVMEK VKSEDAVKMA RELATKEGLL
301: VGISSGANTV AALQLARMPE NKGKLIVTVL PSLGERYLSS ALFEELRQEA EQMQPVPVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.