Factsheet for GSMUA_Achr5P17120_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P17120_001
GSMUA_Achr6P24840_001
GSMUA_Achr9P02430_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59760.1	GSMUA_Achr6P24840_001	AT3G13110.1	11168407
AT3G59760.1	GSMUA_AchrUn_...	AT3G13110.1	11168407
AT3G59760.1	GSMUA_Achr6P24840_001	AT3G13110.1	12063244
AT3G59760.1	GSMUA_AchrUn_...	AT3G13110.1	12063244
AT3G59760.1	GSMUA_Achr5P17120_001	AT3G59760.1	11168407
AT3G59760.1	GSMUA_Achr9P02430_001	AT3G59760.1	11168407

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P02430_001	Banana	plastid	83.07	83.95
VIT_05s0094g00780.t01	Wine grape	plastid	79.69	80.1
KRH50190	Soybean	nucleus, plastid	78.65	77.64
Os01t0978100-01	Rice	plastid	77.08	75.13
KRH71273	Soybean	nucleus, plastid	76.56	74.62
Zm00001d040235_P005	Maize	plastid	76.56	74.24
Zm00001d008379_P001	Maize	plastid	76.3	73.62
Solyc08g014340.2.1	Tomato	plastid	73.96	73.58
PGSC0003DMT400059624	Potato	cytosol, plastid	73.96	73.58
TraesCS3A01G087100.1	Wheat	plastid	74.48	73.52
GSMUA_Achr9P25760_001	Banana	cytosol	61.98	73.46
GSMUA_Achr11P...	Banana	cytosol	61.98	73.46
GSMUA_Achr4P21350_001	Banana	cytosol	61.98	73.23
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	61.98	73.23
TraesCS3D01G087300.1	Wheat	plastid	74.74	73.21
TraesCS3B01G102500.1	Wheat	golgi, plastid	74.74	73.21
EES02674	Sorghum	plastid	76.04	72.64
CDY23400	Canola	plastid	73.44	72.49
Bra037682.1-P	Field mustard	plastid	73.18	72.24
CDY30438	Canola	plastid	72.92	71.98
CDX79804	Canola	plastid	73.7	71.46
CDY17914	Canola	plastid	72.92	71.43
Bra004781.1-P	Field mustard	plastid	73.44	71.21
AT2G43750.1	Thale cress	plastid	71.88	70.41
AT3G59760.1	Thale cress	plastid	73.7	65.36
Bra014529.1-P	Field mustard	plastid	71.61	65.17
CDY45790	Canola	plastid	72.14	64.87
CDX89032	Canola	plastid	72.4	64.8
GSMUA_Achr5P19480_001	Banana	mitochondrion	50.78	54.32
GSMUA_Achr2P16640_001	Banana	cytosol	45.05	50.88
GSMUA_Achr8P00260_001	Banana	mitochondrion	57.29	50.23
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	29.69	26.39

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	InterPro:CysK	InterPro:Cys_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSMUA_Achr5G17120_001
EnsemblPlants:GSMUA_Achr5P17120_001	EnsemblPlants:GSMUA_Achr5T17120_001	UniProt:M0SZ91	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep
ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139
InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000296255E	SEG:seg	:	:	:

Description

Cysteine synthase, chloroplastic/chromoplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G17120_001]

Coordinates

chr5:+:15986557..16007478

Molecular Weight (calculated)

40944.6 Da

IEP (calculated)

7.156

GRAVY (calculated)

-0.021

Length

384 amino acids

Sequence
(BLAST)

001: MASLSNTFPS SFCSQSRSGL FAARPQRCPL SIRRRGIAYA SSGSPRRSLV CEAVSVKPQT EIERLNIAED VSQLIGKTPM VYLNNIVKGC VANIAAKLEI
101: MEPCCSVKDR IGYSMIADAE QRGVITPGES ILVEPTSGNT GIGLAFIAAA KGYKLILTMP ASMSIERRVL LKAFGAELVL TDSAKGMKGA VQKAEEILNN
201: TPNAYMLQQF DNPANPKIHY ESTGPEIWED TRGKVDIFVA GVGTGGTISG VGCFLKEKNP NIKVIGIEPS ESNILSGGKP GPHKIQGIGA GFVPRNLDLE
301: VVDEILEISS DEAVETAKQL ALQEGLLVGI SSGAAAAAAM KVARRPENAG KLIAVVFPSF GERYLSSVLF QSIRDECEKM QPEP

Best Arabidopsis Sequence Match ( AT2G43750.2 )
(BLAST)

001: MAATSSSAFL LNPLTSRHRP FKYSPELSSL SLSSRKAAAF DVSSAAFTLK RQSRSDVVCK AVSIKPEAGV EGLNIADNAA QLIGKTPMVY LNNVVKGCVA
101: SVAAKLEIME PCCSVKDRIG YSMITDAEEK GLITPGKSVL VESTSGNTGI GLAFIAASKG YKLILTMPAS MSLERRVLLR AFGAELVLTE PAKGMTGAIQ
201: KAEEILKKTP NSYMLQQFDN PANPKIHYET TGPEIWEDTR GKIDILVAGI GTGGTITGVG RFIKERKPEL KVIGVEPTES AILSGGKPGP HKIQGIGAGF
301: VPKNLDLAIV DEYIAISSEE AIETSKQLAL QEGLLVGISS GAAAAAAIQV AKRPENAGKL IAVVFPSFGE RYLSTQLFQS IREECEQMQP EL

Arabidopsis Description

OASBCysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.