Factsheet for GSMUA_Achr6P24840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P17120_001
GSMUA_Achr6P24840_001
GSMUA_Achr9P02430_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	GSMUA_Achr6P24840_001	AT1G55920.1	9076992
AT1G55920.1	GSMUA_AchrUn_...	AT1G55920.1	9076992
AT3G13110.1	GSMUA_Achr6P24840_001	AT3G13110.1	11168407
AT3G13110.1	GSMUA_AchrUn_...	AT3G13110.1	11168407
AT3G13110.1	GSMUA_Achr5P17120_001	AT3G59760.1	11168407
AT3G13110.1	GSMUA_Achr9P02430_001	AT3G59760.1	11168407
AT3G13110.1	GSMUA_Achr5P17120_001	AT3G59760.1	12063244
AT3G13110.1	GSMUA_Achr9P02430_001	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	75.0	50.2
GSMUA_Achr4P01080_001	Banana	cytosol	50.61	40.49
KRH05125	Soybean	mitochondrion	38.41	40.13
KRH00049	Soybean	mitochondrion	39.63	38.01
GSMUA_Achr8P27570_001	Banana	plastid	57.93	36.26
CDY52913	Canola	cytosol	57.93	35.85
Bra038031.1-P	Field mustard	cytosol	61.59	34.12
EER92698	Sorghum	cytosol	62.8	33.12
Zm00001d028154_P001	Maize	cytosol	62.2	32.48
CDY53752	Canola	cytosol	60.98	32.47
GSMUA_Achr2P09310_001	Banana	cytosol, peroxisome, plastid	59.76	32.13
CDX84336	Canola	cytosol	60.98	31.75
CDY08269	Canola	cytosol	60.98	31.75
CDY26079	Canola	cytosol	61.59	31.56
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	60.37	31.53
Bra037094.1-P	Field mustard	cytosol	60.37	31.43
TraesCS4B01G263300.1	Wheat	mitochondrion	59.15	31.39
AT1G55920.1	Thale cress	cytosol	59.76	31.21
Os03t0196600-01	Rice	cytosol, plasma membrane	59.76	31.11
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	59.15	30.89
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	57.93	30.25
Bra030821.1-P	Field mustard	cytosol	59.15	30.12
CDY42400	Canola	cytosol	59.15	30.12
VIT_00s0194g00120.t01	Wine grape	plastid	56.1	30.07
CDY10517	Canola	cytosol	59.15	30.03
PGSC0003DMT400057095	Potato	cytosol	60.37	29.91
Solyc07g065340.1.1	Tomato	cytosol	60.37	29.91
Os03t0185000-00	Rice	cytosol, plasma membrane	53.05	28.9
VIT_19s0015g00130.t01	Wine grape	mitochondrion	63.41	27.59
KRH14245	Soybean	mitochondrion	58.54	27.35
KRH73892	Soybean	mitochondrion	58.54	26.97
PGSC0003DMT400037270	Potato	plastid	59.15	26.58
Solyc10g006040.1.1	Tomato	extracellular	59.15	26.58
AT3G13110.1	Thale cress	mitochondrion, plastid	62.2	26.09
KRH46343	Soybean	mitochondrion	60.98	25.84
KRG98542	Soybean	mitochondrion	61.59	25.83
Bra034705.1-P	Field mustard	plastid	61.59	25.7
GSMUA_Achr5P19080_001	Banana	cytosol	48.78	23.6

Protein Annotations

EnsemblPlants:GSMUA_Achr6P24840_001	EnsemblPlants:GSMUA_Achr6T24840_001	EnsemblPlantsGene:GSMUA_Achr6G24840_001	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	InterPro:Hexapep	InterPro:Hexapep_transf_CS	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR42811
PANTHER:PTHR42811:SF2	PFAM:PF00132	ScanProsite:PS00101	SEG:seg	SUPFAM:SSF51161	UniParc:UPI0002963C49
UniProt:M0T9Y0	MapMan:4.1.4.2.1	:	:	:	:

Description

Serine acetyltransferase 3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G24840_001]

Coordinates

chr6:+:25668269..25669057

Molecular Weight (calculated)

17576.9 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.248

Length

164 amino acids

Sequence
(BLAST)

001: MVDDVWCTIQ EEARTEAEEE PFLRKHYYDL GFQALQVHRV AHRLWTEGRR ATALLLQSRT SEVLATTVVG DDVSILHGVT LGGTGKEGGD RHPKIGDGVL
101: LGAGTKILGN VRIGEGTKIG AGSVVLKVVP PRTTAVGNPA TLVNGKENRT GHIVDHTSCS NYAN

Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)

001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI

Arabidopsis Description

SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.