Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030821.1-P | Field mustard | cytosol | 99.07 | 99.07 |
| CDY10517 | Canola | cytosol | 91.93 | 91.64 |
| CDY52913 | Canola | cytosol | 73.91 | 89.81 |
| CDY08269 | Canola | cytosol | 83.54 | 85.4 |
| CDX84336 | Canola | cytosol | 82.3 | 84.13 |
| CDY26079 | Canola | cytosol | 82.92 | 83.44 |
| CDY53752 | Canola | cytosol | 79.5 | 83.12 |
| AT1G55920.1 | Thale cress | cytosol | 77.64 | 79.62 |
| Solyc07g065340.1.1 | Tomato | cytosol | 65.84 | 64.05 |
| PGSC0003DMT400057095 | Potato | cytosol | 65.53 | 63.75 |
| GSMUA_Achr6P24840_001 | Banana | cytosol | 30.12 | 59.15 |
| KRH00049 | Soybean | mitochondrion | 30.43 | 57.31 |
| VIT_19s0015g00130.t01 | Wine grape | mitochondrion | 66.77 | 57.03 |
| Solyc10g006040.1.1 | Tomato | extracellular | 63.04 | 55.62 |
| VIT_00s0194g00120.t01 | Wine grape | plastid | 52.8 | 55.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.93 | 55.1 |
| PGSC0003DMT400037270 | Potato | plastid | 62.42 | 55.07 |
| KRH46343 | Soybean | mitochondrion | 63.35 | 52.71 |
| CDX88588 | Canola | cytosol | 50.62 | 52.58 |
| KRG98542 | Soybean | mitochondrion | 63.66 | 52.43 |
| CDY32882 | Canola | cytoskeleton, cytosol, nucleus | 50.0 | 52.27 |
| CDY11904 | Canola | cytosol | 50.0 | 52.1 |
| KRH73892 | Soybean | mitochondrion | 57.45 | 51.97 |
| KRH14245 | Soybean | mitochondrion | 56.52 | 51.85 |
| TraesCS4B01G263300.1 | Wheat | mitochondrion | 49.69 | 51.78 |
| KRH05125 | Soybean | mitochondrion | 25.16 | 51.59 |
| CDY32760 | Canola | cytosol | 49.07 | 51.3 |
| HORVU4Hr1G071040.1 | Barley | cytosol, mitochondrion | 50.0 | 51.27 |
| TraesCS4A01G042700.1 | Wheat | cytosol, mitochondrion | 49.38 | 50.64 |
| TraesCS4D01G263500.1 | Wheat | cytosol, mitochondrion | 49.38 | 50.64 |
| Zm00001d028154_P001 | Maize | cytosol | 49.07 | 50.32 |
| Os03t0196600-01 | Rice | cytosol, plasma membrane | 48.14 | 49.21 |
| EER92698 | Sorghum | cytosol | 47.52 | 49.2 |
| Os03t0185000-00 | Rice | cytosol, plasma membrane | 45.65 | 48.84 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 40.06 | 40.06 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 40.06 | 40.06 |
| CDY26432 | Canola | cytosol | 18.63 | 38.46 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078HV58 |
| UniProt:A0A078HV58 | EnsemblPlants:CDY42400 | ProteinID:CDY42400 | ProteinID:CDY42400.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00074688001 |
| InterPro:Hexapep | InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 |
| PANTHER:PTHR42811 | PANTHER:PTHR42811:SF2 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 |
| InterPro:Ser_AcTrfase_N | InterPro:Ser_O-AcTrfase | TIGRFAMs:TIGR01172 | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0004EEED2B |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g00140DBnaA08g00140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV58]
Coordinates
chrLK032523:+:140015..141105
Molecular Weight (calculated)
34610.6 Da
IEP (calculated)
6.281
GRAVY (calculated)
0.034
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPCIDTSRS TGKALLCQDD DSRFHYINLF PGRISRSPIT ITSSLVPDFD RDDGDVWFKM LDEAKSDVEQ EPVLSSYYHS SITSHRSLSS ALANILSVKL
101: STLALPSNTL FELFISVLEE SPEMIESAKQ DLLAAKERDP ACVSYVHCFL SFKGFLACQA HRIAHKLWAQ DRKILALLIQ NRVSEAFAVD IHPGAKIGKG
201: VLLDHATAVV IGETAVVGDN VSILHGVTLG GTGKQCGDRH PKIGDGVLIG AGTCVLGNIT IGEGAKVGSG SVVLKDVPPH TTAVGNPARL IGGKENPKML
301: DKIPGLSMDQ TSYLTEWSDY VI
101: STLALPSNTL FELFISVLEE SPEMIESAKQ DLLAAKERDP ACVSYVHCFL SFKGFLACQA HRIAHKLWAQ DRKILALLIQ NRVSEAFAVD IHPGAKIGKG
201: VLLDHATAVV IGETAVVGDN VSILHGVTLG GTGKQCGDRH PKIGDGVLIG AGTCVLGNIT IGEGAKVGSG SVVLKDVPPH TTAVGNPARL IGGKENPKML
301: DKIPGLSMDQ TSYLTEWSDY VI
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.