Factsheet for Os03t0196600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0978100-01
Os03t0185000-00
Os03t0196600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	Os03t0185000-00	AT1G55920.1	9076992
AT1G55920.1	Os03t0196600-01	AT1G55920.1	9076992
AT3G13110.1	Os03t0185000-00	AT3G13110.1	11168407
AT3G13110.1	Os03t0196600-01	AT3G13110.1	11168407
AT3G13110.1	Os01t0978100-01	AT3G59760.1	11168407
AT3G13110.1	Os01t0978100-01	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0185000-00	Rice	cytosol, plasma membrane	82.86	86.71
TraesCS4B01G263300.1	Wheat	mitochondrion	78.1	79.61
EER92698	Sorghum	cytosol	77.46	78.46
Zm00001d028154_P001	Maize	cytosol	77.78	78.03
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	77.78	78.03
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	76.83	77.07
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	76.51	76.75
GSMUA_Achr6P24840_001	Banana	cytosol	31.11	59.76
CDY52913	Canola	cytosol	46.35	55.09
GSMUA_AchrUn_...	Banana	cytosol	41.59	53.47
Bra038031.1-P	Field mustard	cytosol	48.25	51.35
CDY08269	Canola	cytosol	51.11	51.11
AT1G55920.1	Thale cress	cytosol	50.48	50.64
Bra037094.1-P	Field mustard	cytosol	50.48	50.48
CDY26079	Canola	cytosol	50.48	49.69
Os05t0533500-01	Rice	cytosol	49.52	49.68
CDY10517	Canola	cytosol	50.16	48.92
CDY53752	Canola	cytosol	47.62	48.7
VIT_00s0194g00120.t01	Wine grape	plastid	47.3	48.69
Solyc07g065340.1.1	Tomato	cytosol	50.79	48.34
PGSC0003DMT400057095	Potato	cytosol	50.79	48.34
CDY42400	Canola	cytosol	49.21	48.14
Bra030821.1-P	Field mustard	cytosol	49.21	48.14
CDX84336	Canola	cytosol	47.94	47.94
KRH00049	Soybean	mitochondrion	24.13	44.44
KRH05125	Soybean	mitochondrion	21.59	43.31
VIT_19s0015g00130.t01	Wine grape	mitochondrion	50.79	42.44
Solyc10g006040.1.1	Tomato	extracellular	48.25	41.64
KRH14245	Soybean	mitochondrion	46.03	41.31
KRH73892	Soybean	mitochondrion	46.67	41.29
PGSC0003DMT400037270	Potato	plastid	47.62	41.1
AT3G13110.1	Thale cress	mitochondrion, plastid	50.16	40.41
Bra034705.1-P	Field mustard	plastid	50.16	40.2
KRH46343	Soybean	mitochondrion	49.21	40.05
KRG98542	Soybean	mitochondrion	49.52	39.9
Os03t0133900-01	Rice	cytosol	41.59	37.01
Os01t0720700-00	Rice	cytosol, nucleus	1.27	20.0

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	EntrezGene:4331941
ProteinID:ABF94457.1	EMBL:AK288017	ProteinID:BAF11179.2	ProteinID:BAS82773.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0016746	GO:GO:0019344	InterPro:Hexapep	InterPro:Hexapep_transf_CS	EnsemblPlantsGene:Os03g0196600
EnsemblPlants:Os03t0196600-01	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101	PANTHER:PTHR42811
PANTHER:PTHR42811:SF3	UniProt:Q10QH1	SMART:SM00971	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase
TIGRFAMs:TIGR01172	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0000DB44FE	RefSeq:XP_015631062.1	SEG:seg	:

Description

SAT4Similar to satase isoform II. (Os03t0196600-01)

Coordinates

chr3:-:5063818..5065197

Molecular Weight (calculated)

32922.4 Da

IEP (calculated)

6.666

GRAVY (calculated)

0.043

Length

315 amino acids

Sequence
(BLAST)

001: MAACVDKWPP AAYLCRLPEK FYCVLPDCTA TDRPVVTASA APAPAASGSS GDYVWDVLRA EAQDDADDEP LLRKFYHDLV LSRPSLESAL ASLLAAKLCI
101: PGALPQDQLR DLLAGALAAH PEAGRAARAD LVAARDRDPA CAKMVHCFLY YKGFLALQAH RAAHALWSDN RRAPALLLQS RASEVFGVDI HPGARIGCGI
201: LLDHATGVVI GETAVVGYDV SILHGVTLGG TGKESGDRHP KVGDGVLIGA GASVLGNVHI GDGAKIGAGA VVLRDVADGT TAVGNPAKPI IGKKAAPQRR
301: PEELPGVTME QRWSD

Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)

001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI

Arabidopsis Description

SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.