CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92698
EES02674

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	EER92698	AT1G55920.1	9076992
AT3G13110.1	EER92698	AT3G13110.1	11168407
AT3G13110.1	EES02674	AT3G59760.1	11168407
AT3G13110.1	EES02674	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028154_P001	Maize	cytosol	91.96	91.08
TraesCS4B01G263300.1	Wheat	mitochondrion	77.17	77.67
Os03t0196600-01	Rice	cytosol, plasma membrane	78.46	77.46
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	77.49	76.75
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	77.17	76.43
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	77.17	76.43
Os03t0185000-00	Rice	cytosol, plasma membrane	71.06	73.42
GSMUA_Achr6P24840_001	Banana	cytosol	33.12	62.8
CDY52913	Canola	cytosol	46.3	54.34
GSMUA_AchrUn_...	Banana	cytosol	42.77	54.29
OQU87436	Sorghum	cytosol, mitochondrion, peroxisome, plastid	54.02	53.33
EES19864	Sorghum	cytosol	53.38	51.71
Bra038031.1-P	Field mustard	cytosol	48.87	51.35
AT1G55920.1	Thale cress	cytosol	50.48	50.0
CDY53752	Canola	cytosol	49.2	49.68
Solyc07g065340.1.1	Tomato	cytosol	52.73	49.55
PGSC0003DMT400057095	Potato	cytosol	52.73	49.55
CDY08269	Canola	cytosol	49.2	48.57
CDX84336	Canola	cytosol	49.2	48.57
VIT_00s0194g00120.t01	Wine grape	plastid	47.59	48.37
CDY10517	Canola	cytosol	49.84	47.99
Bra037094.1-P	Field mustard	cytosol	48.55	47.94
Bra030821.1-P	Field mustard	cytosol	49.52	47.83
CDY42400	Canola	cytosol	49.2	47.52
CDY26079	Canola	cytosol	48.55	47.19
KRH05125	Soybean	mitochondrion	23.79	47.13
KRH00049	Soybean	mitochondrion	25.08	45.61
KRH14245	Soybean	mitochondrion	49.2	43.59
VIT_19s0015g00130.t01	Wine grape	mitochondrion	52.41	43.24
Solyc10g006040.1.1	Tomato	extracellular	50.16	42.74
KRH73892	Soybean	mitochondrion	48.55	42.42
PGSC0003DMT400037270	Potato	plastid	49.52	42.19
AT3G13110.1	Thale cress	mitochondrion, plastid	51.77	41.18
KRH46343	Soybean	mitochondrion	50.48	40.57
Bra034705.1-P	Field mustard	plastid	51.13	40.46
KRG98542	Soybean	mitochondrion	50.8	40.41
EER92913	Sorghum	cytosol	41.8	38.24

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	EntrezGene:8081887
UniProt:C5WUP1	EnsemblPlants:EER92698	ProteinID:EER92698	ProteinID:EER92698.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019344	InterPro:Hexapep	InterPro:Hexapep_transf_CS	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441
ScanProsite:PS00101	PANTHER:PTHR42811	PANTHER:PTHR42811:SF3	MetaCyc:PWY-6936	MetaCyc:PWY-7274	SMART:SM00971
EnsemblPlantsGene:SORBI_3001G470000	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172	InterPro:Trimer_LpxA-like_sf
UniParc:UPI0001A8294E	RefSeq:XP_002465700.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:74289822..74290849

Molecular Weight (calculated)

32253.4 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.009

Length

311 amino acids

Sequence
(BLAST)

001: MAACVDKWQP THAGRLSGAI YRFLPDGATD RAVTTAAPAS ASGGDDDVWE ELRAEAQADA DAEPLLRKFY GDLVLTRQSL EAALAAHLSA KLCIPGVLPQ
101: DALRDLLAAA LAAHPDAGRA TRADLRAARD RDAACERMVH CFLYYKGFLA LQAHRAAHGL WSDGRSAAAL LLQSRASEVF GVDIHPGARI GSGILFDHAT
201: GIVIGETAVV GNDVSILHGV TLGGTGKESG DRHPKVGDGV LIGAGASVLG NVRIGAGAKI GAGAVVLRDV PEGTTAVGNP AKAVGKKAVP QRRPEEQPGV
301: TMEQGWSDYV I

Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)

001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI

Arabidopsis Description

SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.