Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42400 | Canola | cytosol | 91.64 | 91.93 |
| CDY52913 | Canola | cytosol | 73.06 | 89.06 |
| CDY08269 | Canola | cytosol | 82.04 | 84.13 |
| CDY26079 | Canola | cytosol | 82.35 | 83.12 |
| CDY53752 | Canola | cytosol | 78.64 | 82.47 |
| CDX84336 | Canola | cytosol | 79.88 | 81.9 |
| AT1G55920.1 | Thale cress | cytosol | 77.09 | 79.3 |
| Solyc07g065340.1.1 | Tomato | cytosol | 66.56 | 64.95 |
| PGSC0003DMT400057095 | Potato | cytosol | 66.56 | 64.95 |
| GSMUA_Achr6P24840_001 | Banana | cytosol | 30.03 | 59.15 |
| VIT_19s0015g00130.t01 | Wine grape | mitochondrion | 68.11 | 58.36 |
| KRH00049 | Soybean | mitochondrion | 30.65 | 57.89 |
| VIT_00s0194g00120.t01 | Wine grape | plastid | 53.87 | 56.86 |
| Solyc10g006040.1.1 | Tomato | extracellular | 62.85 | 55.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.8 | 55.1 |
| PGSC0003DMT400037270 | Potato | plastid | 61.92 | 54.79 |
| KRH46343 | Soybean | mitochondrion | 63.78 | 53.23 |
| KRH73892 | Soybean | mitochondrion | 58.51 | 53.09 |
| KRG98542 | Soybean | mitochondrion | 64.09 | 52.94 |
| KRH14245 | Soybean | mitochondrion | 57.28 | 52.71 |
| CDX88588 | Canola | cytosol | 50.15 | 52.26 |
| KRH05125 | Soybean | mitochondrion | 25.39 | 52.23 |
| CDY11904 | Canola | cytosol | 49.85 | 52.1 |
| CDY32882 | Canola | cytoskeleton, cytosol, nucleus | 49.54 | 51.95 |
| TraesCS4B01G263300.1 | Wheat | mitochondrion | 49.23 | 51.46 |
| HORVU4Hr1G071040.1 | Barley | cytosol, mitochondrion | 49.85 | 51.27 |
| CDY32760 | Canola | cytosol | 48.61 | 50.97 |
| Zm00001d028154_P001 | Maize | cytosol | 49.23 | 50.64 |
| TraesCS4D01G263500.1 | Wheat | cytosol, mitochondrion | 49.23 | 50.64 |
| TraesCS4A01G042700.1 | Wheat | cytosol, mitochondrion | 48.92 | 50.32 |
| Os03t0196600-01 | Rice | cytosol, plasma membrane | 48.92 | 50.16 |
| EER92698 | Sorghum | cytosol | 47.99 | 49.84 |
| Os03t0185000-00 | Rice | cytosol, plasma membrane | 45.51 | 48.84 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 40.56 | 40.68 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 40.56 | 40.68 |
| CDY26432 | Canola | cytosol | 18.58 | 38.46 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078FC20 |
| UniProt:A0A078FC20 | EnsemblPlants:CDY10517 | ProteinID:CDY10517 | ProteinID:CDY10517.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00032469001 |
| InterPro:Hexapep | InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 |
| PANTHER:PTHR42811 | PANTHER:PTHR42811:SF2 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 |
| InterPro:Ser_AcTrfase_N | InterPro:Ser_O-AcTrfase | TIGRFAMs:TIGR01172 | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0004EC9E21 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g70970DBnaC03g70970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC20]
Coordinates
chrLK032004:-:106805..107948
Molecular Weight (calculated)
34465.3 Da
IEP (calculated)
6.433
GRAVY (calculated)
0.029
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPCIDTSRS TGKALLSQDD NSRFHYINLF PPGGRISRSP ITITSSLFQD NRVDGDVWAK MLDEAKSDVE QEPVLSSYYH SSIASHGSLE SALANILSVK
101: LSTLALPSNT LFELFISVLE ESPEIIESAK QDLLAAKERD PACVSYVHCF LSFKGFLACQ AHRIAHKLWA QDRKILALLI QNRVSEAFAV DIHPGAKIGK
201: GVLLDHATAV VIGETAVVGD NVSILHGVTL GGTGKQSGDR HPKIGDGVLI GAGTCVLGNI TIGEGAKVGS GSVVLKDVPP HTTAVGNPAR LIGGKENPKM
301: LDKIPGLSMD QTSYLTEWSD YVI
101: LSTLALPSNT LFELFISVLE ESPEIIESAK QDLLAAKERD PACVSYVHCF LSFKGFLACQ AHRIAHKLWA QDRKILALLI QNRVSEAFAV DIHPGAKIGK
201: GVLLDHATAV VIGETAVVGD NVSILHGVTL GGTGKQSGDR HPKIGDGVLI GAGTCVLGNI TIGEGAKVGS GSVVLKDVPP HTTAVGNPAR LIGGKENPKM
301: LDKIPGLSMD QTSYLTEWSD YVI
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.