Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52913 | Canola | cytosol | 78.25 | 90.94 |
| CDX84336 | Canola | cytosol | 88.96 | 86.98 |
| CDY08269 | Canola | cytosol | 83.12 | 81.27 |
| CDY42400 | Canola | cytosol | 83.12 | 79.5 |
| CDY26079 | Canola | cytosol | 81.82 | 78.75 |
| CDY10517 | Canola | cytosol | 82.47 | 78.64 |
| AT1G55920.1 | Thale cress | cytosol | 79.22 | 77.71 |
| Solyc07g065340.1.1 | Tomato | cytosol | 68.18 | 63.44 |
| PGSC0003DMT400057095 | Potato | cytosol | 68.18 | 63.44 |
| GSMUA_Achr6P24840_001 | Banana | cytosol | 32.47 | 60.98 |
| KRH00049 | Soybean | mitochondrion | 32.47 | 58.48 |
| VIT_19s0015g00130.t01 | Wine grape | mitochondrion | 67.86 | 55.44 |
| VIT_00s0194g00120.t01 | Wine grape | plastid | 54.55 | 54.9 |
| Solyc10g006040.1.1 | Tomato | extracellular | 63.64 | 53.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.53 | 53.47 |
| PGSC0003DMT400037270 | Potato | plastid | 62.99 | 53.15 |
| KRH73892 | Soybean | mitochondrion | 61.36 | 53.09 |
| KRH05125 | Soybean | mitochondrion | 26.95 | 52.87 |
| KRG98542 | Soybean | mitochondrion | 65.91 | 51.92 |
| KRH14245 | Soybean | mitochondrion | 59.09 | 51.85 |
| KRH46343 | Soybean | mitochondrion | 64.94 | 51.68 |
| HORVU4Hr1G071040.1 | Barley | cytosol, mitochondrion | 52.6 | 51.59 |
| TraesCS4B01G263300.1 | Wheat | mitochondrion | 51.62 | 51.46 |
| CDY11904 | Canola | cytosol | 51.62 | 51.46 |
| CDX88588 | Canola | cytosol | 51.62 | 51.29 |
| CDY32882 | Canola | cytoskeleton, cytosol, nucleus | 50.65 | 50.65 |
| TraesCS4D01G263500.1 | Wheat | cytosol, mitochondrion | 51.62 | 50.64 |
| CDY32760 | Canola | cytosol | 50.32 | 50.32 |
| TraesCS4A01G042700.1 | Wheat | cytosol, mitochondrion | 51.3 | 50.32 |
| EER92698 | Sorghum | cytosol | 49.68 | 49.2 |
| Zm00001d028154_P001 | Maize | cytosol | 49.68 | 48.73 |
| Os03t0196600-01 | Rice | cytosol, plasma membrane | 48.7 | 47.62 |
| Os03t0185000-00 | Rice | cytosol, plasma membrane | 44.16 | 45.18 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 42.53 | 40.68 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 42.53 | 40.68 |
| CDY26432 | Canola | cytosol | 18.83 | 37.18 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078IUR9 |
| UniProt:A0A078IUR9 | EnsemblPlants:CDY53752 | ProteinID:CDY53752 | ProteinID:CDY53752.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00011337001 |
| InterPro:Hexapep | InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 |
| PANTHER:PTHR42811 | PANTHER:PTHR42811:SF2 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 |
| InterPro:Ser_AcTrfase_N | InterPro:Ser_O-AcTrfase | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0004EE2752 | : |
Description
BnaCnng25440DBnaCnng25440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUR9]
Coordinates
chrLK033234:-:216..1142
Molecular Weight (calculated)
33509.0 Da
IEP (calculated)
6.580
GRAVY (calculated)
-0.129
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPCIYTSNT HLSQDDNSRF RYMNLFPDRH ITKTSNSNSL DGEDDDVWVK MLEEAKSDVE QEPILSNYYY SSITSHRSLD TALANILSVK LSTLTLQSNT
101: LFELFIGVLQ ESPEIMESVK RDLLAAKERD PACLSYVHCF LSFKGFLACQ SHRIAHKLWS QDRKILALLI QNRVSEAFAV DIHPGAKIGD HATGVVIGET
201: AVVGHNVSIL HGVTLGGTGK QCGDRHPKIG DGVLIGAGSC ILGNITIGEG AKVGSGSVVL KDVPPRTTAV GNPARLIGGK ENPKTVDKIP GLTMDQTSYL
301: TQWSDYVI
101: LFELFIGVLQ ESPEIMESVK RDLLAAKERD PACLSYVHCF LSFKGFLACQ SHRIAHKLWS QDRKILALLI QNRVSEAFAV DIHPGAKIGD HATGVVIGET
201: AVVGHNVSIL HGVTLGGTGK QCGDRHPKIG DGVLIGAGSC ILGNITIGEG AKVGSGSVVL KDVPPRTTAV GNPARLIGGK ENPKTVDKIP GLTMDQTSYL
301: TQWSDYVI
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.