Factsheet for TraesCS4B01G263300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G087100.1
TraesCS3B01G102500.1
TraesCS3D01G087300.1
TraesCS4A01G042700.1
TraesCS4B01G263300.1
TraesCS4D01G263500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	TraesCS4A01G042700.1	AT1G55920.1	9076992
AT1G55920.1	TraesCS4B01G263300.1	AT1G55920.1	9076992
AT1G55920.1	TraesCS4D01G263500.1	AT1G55920.1	9076992
AT3G13110.1	TraesCS4A01G042700.1	AT3G13110.1	11168407
AT3G13110.1	TraesCS4B01G263300.1	AT3G13110.1	11168407
AT3G13110.1	TraesCS4D01G263500.1	AT3G13110.1	11168407
AT3G13110.1	TraesCS3A01G087100.1	AT3G59760.1	11168407
AT3G13110.1	TraesCS3B01G102500.1	AT3G59760.1	11168407
AT3G13110.1	TraesCS3D01G087300.1	AT3G59760.1	11168407
AT3G13110.1	TraesCS3A01G087100.1	AT3G59760.1	12063244
AT3G13110.1	TraesCS3B01G102500.1	AT3G59760.1	12063244
AT3G13110.1	TraesCS3D01G087300.1	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	98.06	96.5
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	97.73	96.18
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	94.5	92.99
Os03t0196600-01	Rice	cytosol, plasma membrane	79.61	78.1
EER92698	Sorghum	cytosol	77.67	77.17
Zm00001d028154_P001	Maize	cytosol	76.7	75.48
Os03t0185000-00	Rice	cytosol, plasma membrane	72.82	74.75
GSMUA_Achr6P24840_001	Banana	cytosol	31.39	59.15
CDY52913	Canola	cytosol	48.87	56.98
GSMUA_AchrUn_...	Banana	cytosol	43.37	54.69
TraesCS3B01G321600.1	Wheat	cytosol	53.07	54.13
Bra038031.1-P	Field mustard	cytosol	50.81	53.04
CDY08269	Canola	cytosol	53.4	52.38
PGSC0003DMT400057095	Potato	cytosol	55.99	52.27
Solyc07g065340.1.1	Tomato	cytosol	55.66	51.96
Bra037094.1-P	Field mustard	cytosol	52.75	51.75
CDY53752	Canola	cytosol	51.46	51.62
CDX84336	Canola	cytosol	52.43	51.43
CDY26079	Canola	cytosol	52.75	50.94
AT1G55920.1	Thale cress	cytosol	51.46	50.64
CDY42400	Canola	cytosol	51.78	49.69
Bra030821.1-P	Field mustard	cytosol	51.78	49.69
CDY10517	Canola	cytosol	51.46	49.23
VIT_00s0194g00120.t01	Wine grape	plastid	48.54	49.02
KRH00049	Soybean	mitochondrion	25.89	46.78
KRH05125	Soybean	mitochondrion	23.3	45.86
Solyc10g006040.1.1	Tomato	extracellular	52.75	44.66
PGSC0003DMT400037270	Potato	plastid	52.1	44.11
VIT_19s0015g00130.t01	Wine grape	mitochondrion	53.72	44.03
KRH14245	Soybean	mitochondrion	47.57	41.88
KRH73892	Soybean	mitochondrion	47.57	41.29
KRG98542	Soybean	mitochondrion	52.1	41.18
KRH46343	Soybean	mitochondrion	51.46	41.09
AT3G13110.1	Thale cress	mitochondrion, plastid	51.78	40.92
Bra034705.1-P	Field mustard	plastid	51.78	40.71
TraesCS4B01G330300.1	Wheat	cytosol	40.45	36.98

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
InterPro:Hexapep	InterPro:Hexapep_transf_CS	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101
PANTHER:PTHR42811	PANTHER:PTHR42811:SF3	SMART:SM00971	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase
TIGRFAMs:TIGR01172	EnsemblPlantsGene:TraesCS4B01G263300	EnsemblPlants:TraesCS4B01G263300.1	InterPro:Trimer_LpxA-like_sf	TIGR:cd03354	SEG:seg

Description

No Description!

Coordinates

chr4B:+:533723477..533724406

Molecular Weight (calculated)

32225.6 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.048

Length

309 amino acids

Sequence
(BLAST)

001: MAACVDKWNP AYSCHRISRS IYRFMPDCTV TAPAGAPVNG NGGDEVWEEL YGEAQADAQD EPLLGMFYSE LVLSHPSLEA ALAAHLSAKL CIPGALPQDA
101: LRDILAGALA AHPEASQHTR ADLLAARDRD PACAKMVHCF LYYKGFLALQ AHRAAHALWS EGRRPPALLL QSRASEVFGV DIHPGARIGG GILLDHATGV
201: VIGETAVIGD DVSILHGVTL GGTGKACGDR HPKVGDGVLI GAGASVLGNV RIGDGAKIGA GAVVLRDVAC GTTAVGNPAK PIGKKAAPSL RPEEQPGVTM
301: EQRWSDYVI

Best Arabidopsis Sequence Match ( AT3G13110.1 )
(BLAST)

001: MLPVTSRRHF TMSLYMLRSS SPHINHHSFL LPSFVSSKFK HHTLSPPPSP PPPPPMAACI DTCRTGKPQI SPRDSSKHHD DESGFRYMNY FRYPDRSSFN
101: GTQTKTLHTR PLLEDLDRDA EVDDVWAKIR EEAKSDIAKE PIVSAYYHAS IVSQRSLEAA LANTLSVKLS NLNLPSNTLF DLFSGVLQGN PDIVESVKLD
201: LLAVKERDPA CISYVHCFLH FKGFLACQAH RIAHELWTQD RKILALLIQN RVSEAFAVDF HPGAKIGTGI LLDHATAIVI GETAVVGNNV SILHNVTLGG
301: TGKQCGDRHP KIGDGVLIGA GTCILGNITI GEGAKIGAGS VVLKDVPPRT TAVGNPARLL GGKDNPKTHD KIPGLTMDQT SHISEWSDYV I

Arabidopsis Description

SAT3Serine acetyltransferase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39218]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.