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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 4
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
 mitochondrion: 21766870
msms PMID: 21766870 doi
S Komatsu, A Yamamoto, T Nakamura, MZ Nouri, Y Nanjo, K Nishizawa, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG98542
KRH00049
KRH05125
KRH14245
KRH46343
KRH50190
KRH71273
KRH73892

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G55920.1 KRG98542 AT1G55920.1 9076992
AT1G55920.1 KRH00049 AT1G55920.1 9076992
AT1G55920.1 KRH05125 AT1G55920.1 9076992
AT1G55920.1 KRH14245 AT1G55920.1 9076992
AT1G55920.1 KRH46343 AT1G55920.1 9076992
AT1G55920.1 KRH73892 AT1G55920.1 9076992
AT3G13110.1 KRG98542 AT3G13110.1 11168407
AT3G13110.1 KRH00049 AT3G13110.1 11168407
AT3G13110.1 KRH05125 AT3G13110.1 11168407
AT3G13110.1 KRH14245 AT3G13110.1 11168407
AT3G13110.1 KRH46343 AT3G13110.1 11168407
AT3G13110.1 KRH73892 AT3G13110.1 11168407
AT3G13110.1 KRH50190 AT3G59760.1 11168407
AT3G13110.1 KRH71273 AT3G59760.1 11168407
AT3G13110.1 KRH50190 AT3G59760.1 12063244
AT3G13110.1 KRH71273 AT3G59760.1 12063244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH00049 Soybean mitochondrion 62.42 57.31
GSMUA_Achr6P24840_001 Banana cytosol 40.13 38.41
CDY52913 Canola cytosol 52.87 31.32
GSMUA_AchrUn_... Banana cytosol 47.13 30.2
KRH06519 Soybean cytosol, mitochondrion, nucleus 54.78 30.07
KRH47957 Soybean cytosol, mitochondrion, nucleus 54.14 29.72
PGSC0003DMT400057095 Potato cytosol 62.42 29.61
Solyc07g065340.1.1 Tomato cytosol 62.42 29.61
Bra038031.1-P Field mustard cytosol 53.5 28.38
KRH76556 Soybean cytosol 35.67 27.45
KRH46343 Soybean mitochondrion 67.52 27.39
CDY53752 Canola cytosol 52.87 26.95
KRG98542 Soybean mitochondrion 66.88 26.85
CDX84336 Canola cytosol 53.5 26.67
AT1G55920.1 Thale cress cytosol 52.87 26.43
Bra037094.1-P Field mustard cytosol 52.87 26.35
CDY08269 Canola cytosol 52.87 26.35
CDY26079 Canola cytosol 53.5 26.25
CDY10517 Canola cytosol 52.23 25.39
KRH73892 Soybean mitochondrion 57.32 25.28
Bra030821.1-P Field mustard cytosol 51.59 25.16
CDY42400 Canola cytosol 51.59 25.16
KRH14245 Soybean mitochondrion 56.05 25.07
Solyc10g006040.1.1 Tomato extracellular 57.32 24.66
PGSC0003DMT400037270 Potato plastid 56.05 24.11
EER92698 Sorghum cytosol 47.13 23.79
TraesCS4B01G263300.1 Wheat mitochondrion 45.86 23.3
Zm00001d028154_P001 Maize cytosol 46.5 23.25
AT3G13110.1 Thale cress mitochondrion, plastid 56.69 22.76
Bra034705.1-P Field mustard plastid 56.69 22.65
TraesCS4A01G042700.1 Wheat cytosol, mitochondrion 45.22 22.61
HORVU4Hr1G071040.1 Barley cytosol, mitochondrion 44.59 22.29
TraesCS4D01G263500.1 Wheat cytosol, mitochondrion 44.59 22.29
Os03t0196600-01 Rice cytosol, plasma membrane 43.31 21.59
Os03t0185000-00 Rice cytosol, plasma membrane 36.94 19.27
KRH28896 Soybean mitochondrion 38.85 16.9
KRH07931 Soybean cytosol, mitochondrion 35.67 16.33
KRH69684 Soybean mitochondrion 36.31 14.11
KRH76559 Soybean cytosol 3.18 3.52
Protein Annotations
KEGG:00270+2.3.1.30KEGG:00920+2.3.1.30Gene3D:2.160.10.10MapMan:4.1.4.2.1EMBL:ACUP02010676EnsemblPlantsGene:GLYMA_17G208800
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006535GO:GO:0008150GO:GO:0008152GO:GO:0009001GO:GO:0009058
GO:GO:0009987GO:GO:0016740GO:GO:0019344InterPro:HexapepUniProt:K7MN02EnsemblPlants:KRH05125
ProteinID:KRH05125ProteinID:KRH05125.1PFAM:PF00132PIRSF:PIRSF000441PANTHER:PTHR42811PANTHER:PTHR42811:SF2
MetaCyc:PWY-6936MetaCyc:PWY-7274SUPFAM:SSF51161InterPro:Ser_O-AcTrfaseInterPro:Trimer_LpxA-like_sfUniParc:UPI000295E2B6
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr17:-:34284961..34288835
Molecular Weight (calculated)
16470.2 Da
IEP (calculated)
9.270
GRAVY (calculated)
0.220
Length
157 amino acids
Sequence
(BLAST)
001: MFKFEWLFGT PKVELVKHVT ALAIGPPSPS KGSLPLFLVL SSSHGEGLVV GETTLIGNNV SILHNVTLGG TSKASGDRHL KIGDGVLIGP GTCILGNIKI
101: GDGAKIGACF VVLKEVPPRT TIVGNPARVV GGKDNPIKLD KMPSFTMDHT SWSDYVI
Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.