Factsheet for TraesCS4A01G042700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G087100.1
TraesCS3B01G102500.1
TraesCS3D01G087300.1
TraesCS4A01G042700.1
TraesCS4B01G263300.1
TraesCS4D01G263500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	TraesCS4A01G042700.1	AT1G55920.1	9076992
AT1G55920.1	TraesCS4B01G263300.1	AT1G55920.1	9076992
AT1G55920.1	TraesCS4D01G263500.1	AT1G55920.1	9076992
AT3G13110.1	TraesCS4A01G042700.1	AT3G13110.1	11168407
AT3G13110.1	TraesCS4B01G263300.1	AT3G13110.1	11168407
AT3G13110.1	TraesCS4D01G263500.1	AT3G13110.1	11168407
AT3G13110.1	TraesCS3A01G087100.1	AT3G59760.1	11168407
AT3G13110.1	TraesCS3B01G102500.1	AT3G59760.1	11168407
AT3G13110.1	TraesCS3D01G087300.1	AT3G59760.1	11168407
AT3G13110.1	TraesCS3A01G087100.1	AT3G59760.1	12063244
AT3G13110.1	TraesCS3B01G102500.1	AT3G59760.1	12063244
AT3G13110.1	TraesCS3D01G087300.1	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G263300.1	Wheat	mitochondrion	96.18	97.73
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	96.5	96.5
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	92.99	92.99
EER92698	Sorghum	cytosol	76.43	77.17
Os03t0196600-01	Rice	cytosol, plasma membrane	77.07	76.83
Zm00001d028154_P001	Maize	cytosol	75.16	75.16
Os03t0185000-00	Rice	cytosol, plasma membrane	71.02	74.09
GSMUA_Achr6P24840_001	Banana	cytosol	30.89	59.15
CDY52913	Canola	cytosol	47.77	56.6
GSMUA_AchrUn_...	Banana	cytosol	42.68	54.69
TraesCS3A01G287400.1	Wheat	mitochondrion	51.91	53.8
Bra038031.1-P	Field mustard	cytosol	49.68	52.7
TraesCS1A01G353800.1	Wheat	cytosol	51.91	52.08
CDY08269	Canola	cytosol	51.91	51.75
PGSC0003DMT400057095	Potato	cytosol	54.14	51.36
CDY53752	Canola	cytosol	50.32	51.3
Bra037094.1-P	Field mustard	cytosol	51.27	51.11
Solyc07g065340.1.1	Tomato	cytosol	53.82	51.06
CDX84336	Canola	cytosol	50.96	50.79
AT1G55920.1	Thale cress	cytosol	50.32	50.32
CDY26079	Canola	cytosol	51.27	50.31
Bra030821.1-P	Field mustard	cytosol	50.64	49.38
CDY42400	Canola	cytosol	50.64	49.38
CDY10517	Canola	cytosol	50.32	48.92
VIT_00s0194g00120.t01	Wine grape	plastid	47.45	48.69
KRH00049	Soybean	mitochondrion	25.16	46.2
KRH05125	Soybean	mitochondrion	22.61	45.22
Solyc10g006040.1.1	Tomato	extracellular	51.59	44.38
PGSC0003DMT400037270	Potato	plastid	50.96	43.84
VIT_19s0015g00130.t01	Wine grape	mitochondrion	52.23	43.5
KRH14245	Soybean	mitochondrion	46.18	41.31
KRH73892	Soybean	mitochondrion	46.82	41.29
Bra034705.1-P	Field mustard	plastid	50.64	40.46
AT3G13110.1	Thale cress	mitochondrion, plastid	50.32	40.41
KRH46343	Soybean	mitochondrion	49.68	40.31
KRG98542	Soybean	mitochondrion	50.0	40.15
TraesCS5A01G501800.1	Wheat	cytosol	40.13	37.39

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
InterPro:Hexapep	InterPro:Hexapep_transf_CS	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101
PANTHER:PTHR42811	PANTHER:PTHR42811:SF3	SMART:SM00971	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase
TIGRFAMs:TIGR01172	EnsemblPlantsGene:TraesCS4A01G042700	EnsemblPlants:TraesCS4A01G042700.1	InterPro:Trimer_LpxA-like_sf	TIGR:cd03354	SEG:seg

Description

No Description!

Coordinates

chr4A:+:35876625..35877924

Molecular Weight (calculated)

32583.1 Da

IEP (calculated)

6.777

GRAVY (calculated)

0.086

Length

314 amino acids

Sequence
(BLAST)

001: MAACVDKWNP AYSCHRISRS IYRFLPDCTV AAPAGAPVSG NGGCCNGGDE VWEELYGEAQ ADAQDEPLLG MFYSELVLSH PTLEAALAAH LSAKLCIPGA
101: LPRDALRDIL AGALAAHPEA SQHTRADLLA ARDRDPACAK MVHCFLYYKG FLALQAHRAA HALWSEGRRP PALLLQSRAS EVFGVDIHPG ARIGGGILLD
201: HATGVVIGET AVIGDDVSIL HGVTLGGTGK ACGDRHPKVG DGVLIGAGAS VLGNVRIGAG AKIGAGAVVL RDVACGTTAV GNPAKPIGKK AAPSLRPEEQ
301: PGVTMEQRWS DYVI

Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)

001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI

Arabidopsis Description

SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.