Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038031.1-P | Field mustard | cytosol | 97.36 | 87.16 |
| CDX84336 | Canola | cytosol | 93.58 | 78.73 |
| CDY53752 | Canola | cytosol | 90.94 | 78.25 |
| CDY08269 | Canola | cytosol | 87.92 | 73.97 |
| CDY42400 | Canola | cytosol | 89.81 | 73.91 |
| CDY10517 | Canola | cytosol | 89.06 | 73.06 |
| CDY26079 | Canola | cytosol | 87.55 | 72.5 |
| AT1G55920.1 | Thale cress | cytosol | 85.28 | 71.97 |
| PGSC0003DMT400057095 | Potato | cytosol | 73.96 | 59.21 |
| Solyc07g065340.1.1 | Tomato | cytosol | 73.96 | 59.21 |
| KRH00049 | Soybean | mitochondrion | 37.74 | 58.48 |
| GSMUA_Achr6P24840_001 | Banana | cytosol | 35.85 | 57.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.43 | 53.47 |
| VIT_19s0015g00130.t01 | Wine grape | mitochondrion | 75.85 | 53.32 |
| KRH05125 | Soybean | mitochondrion | 31.32 | 52.87 |
| CDY11904 | Canola | cytosol | 60.38 | 51.78 |
| VIT_00s0194g00120.t01 | Wine grape | plastid | 59.62 | 51.63 |
| CDX88588 | Canola | cytosol | 60.38 | 51.61 |
| CDY32882 | Canola | cytoskeleton, cytosol, nucleus | 59.62 | 51.3 |
| CDY32760 | Canola | cytosol | 59.25 | 50.97 |
| Solyc10g006040.1.1 | Tomato | extracellular | 69.81 | 50.68 |
| KRH73892 | Soybean | mitochondrion | 67.17 | 50.0 |
| KRG98542 | Soybean | mitochondrion | 73.58 | 49.87 |
| PGSC0003DMT400037270 | Potato | plastid | 68.68 | 49.86 |
| KRH46343 | Soybean | mitochondrion | 72.45 | 49.61 |
| KRH14245 | Soybean | mitochondrion | 65.28 | 49.29 |
| TraesCS4B01G263300.1 | Wheat | mitochondrion | 56.98 | 48.87 |
| HORVU4Hr1G071040.1 | Barley | cytosol, mitochondrion | 57.36 | 48.41 |
| TraesCS4D01G263500.1 | Wheat | cytosol, mitochondrion | 56.98 | 48.09 |
| TraesCS4A01G042700.1 | Wheat | cytosol, mitochondrion | 56.6 | 47.77 |
| Zm00001d028154_P001 | Maize | cytosol | 55.09 | 46.5 |
| Os03t0196600-01 | Rice | cytosol, plasma membrane | 55.09 | 46.35 |
| EER92698 | Sorghum | cytosol | 54.34 | 46.3 |
| Os03t0185000-00 | Rice | cytosol, plasma membrane | 50.19 | 44.19 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 47.92 | 39.44 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 47.92 | 39.44 |
| CDY26432 | Canola | cytosol | 21.51 | 36.54 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078IV97 |
| UniProt:A0A078IV97 | EnsemblPlants:CDY52913 | ProteinID:CDY52913 | ProteinID:CDY52913.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00008091001 |
| InterPro:Hexapep | InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 |
| PANTHER:PTHR42811 | PANTHER:PTHR42811:SF2 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 |
| InterPro:Ser_AcTrfase_N | InterPro:Ser_O-AcTrfase | TIGRFAMs:TIGR01172 | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0004EE3F18 |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g00050DBnaA06g00050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IV97]
Coordinates
chrLK033141:+:55863..56846
Molecular Weight (calculated)
28523.3 Da
IEP (calculated)
6.940
GRAVY (calculated)
0.025
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQEYLRTSD VEQEPILSSY YYSSITSHRS LDSALANILS VKLSTLTLPS STLFELFTSV LQESPEIMES AKQDLLAAKE RDPACLSYVH CFLSFKGFLA
101: CQSHRIAHKL WTQDRKILAL LIQNRVSEAF AVDIHPGAKI GRGVLLDHAT GVVIGETAVV GDNVSILHGV TLGGTGKQCG DRHPKIGDGV LIGAGSCILG
201: NITIGEGAKV GSGSVVLKDV PPRTTAVGNP ARLIGGKENP KRVDKIPGLT MDQTSYLTEW SDYVI
101: CQSHRIAHKL WTQDRKILAL LIQNRVSEAF AVDIHPGAKI GRGVLLDHAT GVVIGETAVV GDNVSILHGV TLGGTGKQCG DRHPKIGDGV LIGAGSCILG
201: NITIGEGAKV GSGSVVLKDV PPRTTAVGNP ARLIGGKENP KRVDKIPGLT MDQTSYLTEW SDYVI
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.