CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29188	Canola	cytosol, peroxisome, plastid	98.45	98.45
Bra024500.1-P	Field mustard	cytosol, peroxisome, plastid	93.79	94.97
AT2G17640.1	Thale cress	cytosol	88.2	87.93
KRH76556	Soybean	cytosol	43.79	69.12
VIT_04s0210g00190.t01	Wine grape	cytosol	63.98	62.24
Solyc02g082850.2.1	Tomato	cytosol	68.32	61.8
HORVU4Hr1G081310.6	Barley	mitochondrion	61.8	61.61
GSMUA_Achr5P19080_001	Banana	cytosol	63.98	60.77
KRH28896	Soybean	mitochondrion	68.01	60.66
PGSC0003DMT400003992	Potato	cytosol	67.39	60.61
TraesCS5A01G501800.1	Wheat	cytosol	61.8	59.05
TraesCS4B01G330300.1	Wheat	cytosol	61.8	58.88
TraesCS4D01G327200.1	Wheat	cytosol	61.49	58.75
Zm00001d027536_P003	Maize	cytoskeleton, cytosol, peroxisome	61.18	57.94
EER92913	Sorghum	cytosol	60.56	57.35
KRH07931	Soybean	cytosol, mitochondrion	60.87	57.14
Os03t0133900-01	Rice	cytosol	62.11	56.5
CDY26432	Canola	cytosol	26.4	54.49
CDY52913	Canola	cytosol	39.44	47.92
KRH76559	Soybean	cytosol	20.5	46.48
CDY32882	Canola	cytoskeleton, cytosol, nucleus	43.48	45.45
KRH69684	Soybean	mitochondrion	56.83	45.3
CDX88588	Canola	cytosol	43.48	45.16
CDY11904	Canola	cytosol	43.17	44.98
CDY32760	Canola	cytosol	42.86	44.81
CDY53752	Canola	cytosol	40.68	42.53
CDY08269	Canola	cytosol	40.68	41.59
CDX84336	Canola	cytosol	40.37	41.27
CDY26079	Canola	cytosol	40.99	41.25
CDY10517	Canola	cytosol	40.68	40.56
CDY42400	Canola	cytosol	40.06	40.06

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	GO:A0A078F093
UniProt:A0A078F093	EnsemblPlants:CDY07835	ProteinID:CDY07835	ProteinID:CDY07835.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00124982001
InterPro:Hexapep	InterPro:Hexapep_transf_CS	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101
PANTHER:PTHR42811	PANTHER:PTHR42811:SF8	MetaCyc:PWY-6936	MetaCyc:PWY-7274	SMART:SM00971	SUPFAM:SSF51161
InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00136	UniParc:UPI0004EE3F59

Description

BnaC03g47870DBnaC03g47870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F093]

Coordinates

chrLK031981:+:296153..298529

Molecular Weight (calculated)

34371.4 Da

IEP (calculated)

6.341

GRAVY (calculated)

0.045

Length

322 amino acids

Sequence
(BLAST)

001: MDGDELPFEM GIAVYAKGTN KLEFDPVLLD SGYDPIWDAI REEAKLEAEK EPILSSFLYA GILAHECLEQ ALGFVLANRL QNPTLLATQL LDIFNGVMMH
101: DKGIQRSIRH DIQAFKDRDP ACLSYSSAIL HLKGYHALQA YRVAHKLWNQ GRTLLALALQ SRISEVFGID IHPAAKIGEG ILLDHGTGVV IGETAVISNH
201: VSILHGVTLG GTGKETGDRH PKIGEGALLG ACVTVLGNIS IGVGAMVAAG SLVLKDVPPH SVVAGNPAKL IRVIDKQDPS LAMKHDATKE FFRHVADGYK
301: AAIPNGAVSS GDAENGHTNS AT

Best Arabidopsis Sequence Match ( AT2G17640.1 )
(BLAST)

001: MNGDELPFES GFEVYAKGTH KSEFDSNLLD PRSDPIWDAI REEAKLEAEK EPILSSFLYA GILAHDCLEQ ALGFVLANRL QNPTLLATQL LDIFYGVMMH
101: DKGIQSSIRH DLQAFKDRDP ACLSYSSAIL HLKGYHALQA YRVAHKLWNE GRKLLALALQ SRISEVFGID IHPAARIGEG ILLDHGTGVV IGETAVIGNG
201: VSILHGVTLG GTGKETGDRH PKIGEGALLG ACVTILGNIS IGAGAMVAAG SLVLKDVPSH SVVAGNPAKL IRVMEEQDPS LAMKHDATKE FFRHVADGYK
301: GAQSNGPSLS AGDTEKGHTN STS

Arabidopsis Description

SAT2Serine acetyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8S895]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.